Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.328549	Eif4a1	eukaryotic translation initiation factor 4A1	11	11 39.0 cM	13681
Gene Ontology	ATP binding | ATP dependent helicase activity | DNA binding | helicase activity | hydrolase activity | nucleic acid binding | protein biosynthesis | RNA binding | translation initiation factor activity
Human Homolog	EIF4A1[eukaryotic translation initiation factor 4A, isoform 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 42 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTGACCGAAG (2) 35.9 0.0359 P8 Cb GC AATCTCTCAG (2) 3.3 0.0033 P8 Cb GC AGGGAGTTCC (4) 3.3 0.0033 P8 Cb GC AGCAACACAG 1.6 0.0016 Cb medulloblastoma GTGACCGAAG (2) 6.9 0.0069 P8 GC+1d culture GTGACCGAAG (2) 30.8 0.0308 P8 GC+SHH+1d culture GTGACCGAAG (2) 42.2 0.0422 P8 GC+SHH+1d culture AGCAACACAG 2.3 0.0023 P8 GC+SHH+1d culture TTTGGGGGGG (2) 1.2 0.0012 3T3 fibroblasts GTGACCGAAG (2) 80.6 0.0806 E15 cortex GTGACCGAAG (2) 39.6 0.0396 E15 cortex CACGGAGATA 4.9 0.0049 P1 cortex GTGACCGAAG (2) 9.1 0.0091 Hypothalamus GTGACCGAAG (2) 5.4 0.0054 E12.5 retina GTGACCGAAG (2) 31.9 0.0319 E12.5 retina AGCAACACAG 1.9 0.0019 E14.5 retina AATCTCTCAG (2) 5.5 0.0055 E14.5 retina AGCAACACAG 1.8 0.0018 E14.5 retina CTTAACCGGA (2) 1.8 0.0018 E14.5 retina GTGACCGAAG (2) 1.8 0.0018 E16.5 retina GTGACCGAAG (2) 5.4 0.0054 E16.5 retina AGCAACACAG 3.6 0.0036 E16.5 retina CACGGAGATA 3.6 0.0036 E16.5 retina AATCTCTCAG (2) 1.8 0.0018 E16.5 retina TTTGGGGGGG (2) 1.8 0.0018 E18.5 retina GTGACCGAAG (2) 16.4 0.0164 E18.5 retina AGCAACACAG 1.8 0.0018 E18.5 retina AGGGAGTTCC (4) 1.8 0.0018 E18.5 retina CTTAACCGGA (2) 1.8 0.0018 P0.5 retina GTGACCGAAG (2) 27.5 0.0275 P0.5 retina AGCAACACAG 2 0.002 P2.5 retina GTGACCGAAG (2) 12.3 0.0123 P4.5 retina GTGACCGAAG (2) 7.9 0.0079 P6.5 retina GTGACCGAAG (2) 20 0.02 P6.5 retina TTTGGGGGGG (2) 3.3 0.0033 P10.5 crx- retina GTGACCGAAG (2) 5.6 0.0056 P10.5 crx- retina AGGGAGTTCC (4) 1.9 0.0019 P10.5 crx+ retina GTGACCGAAG (2) 32.7 0.0327 P10.5 crx+ retina AGCAACACAG 1.9 0.0019 P10.5 crx+ retina CTTAACCGGA (2) 1.9 0.0019 Adult retinal GTGACCGAAG (2) 3.7 0.0037 ONL GTGACCGAAG (2) 15.3 0.0153