Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.328914
9330112F22Rik
RIKEN cDNA 9330112F22 gene
17
319237
Mm.328914
Ppard
peroxisome proliferator activator receptor delta
17
17 13.5 cM
19015
Mm.328914
1810013A23Rik
RIKEN cDNA 1810013A23 gene
17
69050
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 37 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TTTGCAGCAT
(
6
)
6.5
0.0065
P8 Cb GC
CTGCCCTCCA
(
3
)
3.3
0.0033
Cb medulloblastoma
TTTGCAGCAT
(
6
)
2.3
0.0023
P8 GC+1d culture
TTTGCAGCAT
(
6
)
6.8
0.0068
P8 GC+1d culture
CTGCCCTCCA
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
TTTGCAGCAT
(
6
)
7
0.007
P8 GC+SHH+1d culture
CTGCCCTCCA
(
3
)
2.3
0.0023
3T3 fibroblasts
CTGCCCTCCA
(
3
)
3.5
0.0035
3T3 fibroblasts
CTGGCCTCCA
(
4
)
3.5
0.0035
E15 cortex
CTGCCCTCCA
(
3
)
4.9
0.0049
E15 cortex
CTGGCCTCCA
(
4
)
4.9
0.0049
E15 cortex
TTTGCAGCAT
(
6
)
4.9
0.0049
P1 cortex
CTGCCCTCCA
(
3
)
13.6
0.0136
Hypothalamus
CTGCCCTCCA
(
3
)
5.4
0.0054
Hypothalamus
TTTGCAGCAT
(
6
)
1.8
0.0018
E12.5 retina
CTGCCCTCCA
(
3
)
5.6
0.0056
E12.5 retina
TTTGCAGCAT
(
6
)
3.8
0.0038
E14.5 retina
CTGCCCTCCA
(
3
)
3.6
0.0036
E14.5 retina
CTGGCCTCCA
(
4
)
1.8
0.0018
E14.5 retina
TTTGCAGCAT
(
6
)
1.8
0.0018
E16.5 retina
CTGGCCTCCA
(
4
)
1.8
0.0018
E18.5 retina
CTGCCCTCCA
(
3
)
1.8
0.0018
P0.5 retina
CTGCCCTCCA
(
3
)
3.9
0.0039
P4.5 retina
CTGGCCTCCA
(
4
)
2
0.002
P4.5 retina
TTTGCAGCAT
(
6
)
2
0.002
P6.5 retina
CTGCCCTCCA
(
3
)
11.7
0.0117
P6.5 retina
TTTGCAGCAT
(
6
)
1.7
0.0017
P10.5 crx- retina
CTGGCCTCCA
(
4
)
1.9
0.0019
P10.5 crx- retina
TTTGCAGCAT
(
6
)
1.9
0.0019
P10.5 crx+ retina
ACACTGGCTC
(
4
)
1.9
0.0019
P10.5 crx+ retina
CTGGCCTCCA
(
4
)
1.9
0.0019
P10.5 crx+ retina
TTTGCAGCAT
(
6
)
1.9
0.0019
Adult retinal
TTTGCAGCAT
(
6
)
3.7
0.0037
Adult retinal
ACACTGGCTC
(
4
)
1.9
0.0019
ONL
CTGGCCTCCA
(
4
)
3.8
0.0038
ONL
ACACTGGCTC
(
4
)
1.9
0.0019
ONL
TTTGCAGCAT
(
6
)
1.9
0.0019
