Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.331
Ubc
ubiquitin C
5
5 64.0 cM
22190
Mm.331
AV046995
expressed sequence AV046995
15
105994
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 47 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CAGATCTTTG
(
2
)
34.3
0.0343
P8 Cb GC
TCAGATCTTT
(
2
)
13.1
0.0131
P8 Cb GC
ACACCATAGA
(
2
)
1.6
0.0016
P8 Cb GC
GCCGGCAGCC
(
2
)
1.6
0.0016
Cb medulloblastoma
CAGATCTTTG
(
2
)
9.2
0.0092
Cb medulloblastoma
ACACCATAGA
(
2
)
2.3
0.0023
Cb medulloblastoma
CCACCTCTGA
(
2
)
2.3
0.0023
P8 GC+1d culture
CAGATCTTTG
(
2
)
41.1
0.0411
P8 GC+1d culture
TCAGATCTTT
(
2
)
5.7
0.0057
P8 GC+1d culture
CCACCTCTGA
(
2
)
2.3
0.0023
P8 GC+SHH+1d culture
CAGATCTTTG
(
2
)
42.2
0.0422
P8 GC+SHH+1d culture
TCAGATCTTT
(
2
)
2.3
0.0023
P8 GC+SHH+1d culture
CAGATTTTTC
(
2
)
1.2
0.0012
P8 GC+SHH+1d culture
GCCGGCAGCC
(
2
)
1.2
0.0012
3T3 fibroblasts
CAGATCTTTG
(
2
)
7
0.007
3T3 fibroblasts
CCACCTCTGA
(
2
)
3.5
0.0035
E15 cortex
CAGATCTTTG
(
2
)
24.7
0.0247
E15 cortex
TGACCTCGGG
(
2
)
4.9
0.0049
P1 cortex
CAGATCTTTG
(
2
)
40.9
0.0409
Hypothalamus
CAGATCTTTG
(
2
)
14.5
0.0145
Hypothalamus
CCACCTCTGA
(
2
)
3.6
0.0036
Hypothalamus
GCCGGCAGCC
(
2
)
1.8
0.0018
Hypothalamus
TGACCTCGGG
(
2
)
1.8
0.0018
E12.5 retina
CAGATCTTTG
(
2
)
26.3
0.0263
E12.5 retina
TGACCTCGGG
(
2
)
1.9
0.0019
E14.5 retina
CAGATCTTTG
(
2
)
10.9
0.0109
E14.5 retina
GCCGGCAGCC
(
2
)
1.8
0.0018
E14.5 retina
TCAGATCTTT
(
2
)
1.8
0.0018
E14.5 retina
TGACCTCGGG
(
2
)
1.8
0.0018
E16.5 retina
CAGATCTTTG
(
2
)
19.9
0.0199
E16.5 retina
CCACCTCTGA
(
2
)
7.2
0.0072
E18.5 retina
CAGATCTTTG
(
2
)
12.7
0.0127
E18.5 retina
TGACCTCGGG
(
2
)
1.8
0.0018
P0.5 retina
CAGATCTTTG
(
2
)
35.3
0.0353
P2.5 retina
CAGATCTTTG
(
2
)
26.4
0.0264
P4.5 retina
CAGATCTTTG
(
2
)
7.9
0.0079
P6.5 retina
CAGATCTTTG
(
2
)
23.3
0.0233
P10.5 crx- retina
CAGATCTTTG
(
2
)
3.7
0.0037
P10.5 crx- retina
CCACCTCTGA
(
2
)
1.9
0.0019
P10.5 crx+ retina
CAGATCTTTG
(
2
)
9.6
0.0096
P10.5 crx+ retina
TGACCTCGGG
(
2
)
1.9
0.0019
Adult retinal
CAGATCTTTG
(
2
)
25.9
0.0259
Adult retinal
CAGATTTTTC
(
2
)
1.9
0.0019
Adult retinal
TGACCTCGGG
(
2
)
1.9
0.0019
ONL
CAGATCTTTG
(
2
)
19.2
0.0192
ONL
ACACCATAGA
(
2
)
1.9
0.0019
ONL
CAGATTTTTC
(
2
)
1.9
0.0019
