Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.332840	Ptcd1	pentatricopeptide repeat domain 1	5		71799
Human Homolog	PTCD1[pentatricopeptide repeat domain 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 34 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGCTGTACAG (3) 11.4 0.0114 Cb medulloblastoma AGCTGTACAG (3) 9.2 0.0092 Cb medulloblastoma CTTCCCCCCC 4.6 0.0046 P8 GC+1d culture AGCTGTACAG (3) 14.8 0.0148 P8 GC+1d culture CTTCCCCCCC 1.1 0.0011 P8 GC+SHH+1d culture AGCTGTACAG (3) 23.4 0.0234 P8 GC+SHH+1d culture CTTCCCCCCC 1.2 0.0012 3T3 fibroblasts AGCTGTACAG (3) 49.1 0.0491 3T3 fibroblasts CTTCCCCCCC 3.5 0.0035 E15 cortex CTTCCCCCCC 9.9 0.0099 E15 cortex AGCTGTACAG (3) 4.9 0.0049 P1 cortex AGCTGTACAG (3) 4.5 0.0045 P1 cortex CTTCCCCCCC 4.5 0.0045 Hypothalamus AGCTGTACAG (3) 14.5 0.0145 Hypothalamus CTTCCCCCCC 3.6 0.0036 E12.5 retina AGCTGTACAG (3) 22.5 0.0225 E14.5 retina AGCTGTACAG (3) 23.7 0.0237 E16.5 retina AGCTGTACAG (3) 16.3 0.0163 E16.5 retina CTTCCCCCCC 5.4 0.0054 E18.5 retina AGCTGTACAG (3) 14.6 0.0146 E18.5 retina CTTCCCCCCC 1.8 0.0018 E18.5 retina TGGAAGCACT (2) 1.8 0.0018 P0.5 retina AGCTGTACAG (3) 13.7 0.0137 P2.5 retina AGCTGTACAG (3) 33.4 0.0334 P4.5 retina AGCTGTACAG (3) 13.9 0.0139 P4.5 retina TGGAAGCACT (2) 2 0.002 P6.5 retina AGCTGTACAG (3) 13.3 0.0133 P6.5 retina TGGAAGCACT (2) 1.7 0.0017 P10.5 crx- retina AGCTGTACAG (3) 18.6 0.0186 P10.5 crx+ retina AGCTGTACAG (3) 19.2 0.0192 P10.5 crx+ retina TGGAAGCACT (2) 1.9 0.0019 Adult retinal AGCTGTACAG (3) 13 0.013 Adult retinal CTTCCCCCCC 5.6 0.0056 ONL AGCTGTACAG (3) 13.4 0.0134