Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.333233	D6Ertd318e	DNA segment, Chr 6, ERATO Doi 318, expressed	6	6 38.0 cM	52316
Mm.333233	Rab7	RAB7, member RAS oncogene family	6	6 38.5 cM	19349
Gene Ontology	DNA binding | Golgi apparatus | GTP binding | intracellular protein transport | late endosome | protein transport | regulation of transcription, DNA-dependent | small GTPase mediated signal transduction | two-component signal transduction system (phosphorelay)
Human Homolog	RAB7[RAB7, member RAS oncogene family]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 70 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCTTGCTTCC (2) 14.7 0.0147 P8 Cb GC CAGATTTGGG (3) 1.6 0.0016 P8 Cb GC GAAAGCTTAC (3) 1.6 0.0016 P8 Cb GC TACTATAAGA (3) 1.6 0.0016 P8 Cb GC TTAATATAAT (2) 1.6 0.0016 Cb medulloblastoma GCTTGCTTCC (2) 23.1 0.0231 Cb medulloblastoma CAGGTCTGGG (3) 4.6 0.0046 Cb medulloblastoma CAGATCTGGG (2) 2.3 0.0023 Cb medulloblastoma CCCACTGCAC (2) 2.3 0.0023 Cb medulloblastoma TACTATAAGA (3) 2.3 0.0023 P8 GC+1d culture GCTTGCTTCC (2) 16 0.016 P8 GC+1d culture TTAATATATG (2) 3.4 0.0034 P8 GC+1d culture ATGCAGGGCA (3) 1.1 0.0011 P8 GC+1d culture CAGGTCTGGG (3) 1.1 0.0011 P8 GC+1d culture TACTATAAGA (3) 1.1 0.0011 P8 GC+SHH+1d culture GCTTGCTTCC (2) 21.1 0.0211 P8 GC+SHH+1d culture CAGATTTGGG (3) 1.2 0.0012 P8 GC+SHH+1d culture TTAATATATG (2) 1.2 0.0012 3T3 fibroblasts GCTTGCTTCC (2) 10.5 0.0105 3T3 fibroblasts CCCACTGCAC (2) 7 0.007 3T3 fibroblasts ATGCAGGGCA (3) 3.5 0.0035 E15 cortex CAGATTTGGG (3) 14.8 0.0148 E15 cortex GCTTGCTTCC (2) 9.9 0.0099 E15 cortex ATGCAGGGCA (3) 4.9 0.0049 E15 cortex CAGATCTGGG (2) 4.9 0.0049 P1 cortex GCTTGCTTAC (5) 4.5 0.0045 P1 cortex GCTTGCTTCC (2) 4.5 0.0045 Hypothalamus GCTTGCTTCC (2) 10.9 0.0109 Hypothalamus ATGCAGGGCA (3) 1.8 0.0018 Hypothalamus CAGATCTGGG (2) 1.8 0.0018 Hypothalamus CAGATTTGGG (3) 1.8 0.0018 Hypothalamus CAGGTCTGGG (3) 1.8 0.0018 Hypothalamus GAAAGCTTAC (3) 1.8 0.0018 Hypothalamus TACTATAAGA (3) 1.8 0.0018 Hypothalamus TTAATATATG (2) 1.8 0.0018 E12.5 retina GCTTGCTTCC (2) 7.5 0.0075 E12.5 retina CAGGTCTGGG (3) 1.9 0.0019 E12.5 retina CCCACTGCAC (2) 1.9 0.0019 E12.5 retina TACTATAAGA (3) 1.9 0.0019 E14.5 retina GCTTGCTTCC (2) 3.6 0.0036 E14.5 retina TGGAGCAGGC (2) 3.6 0.0036 E14.5 retina TACTATAAGA (3) 1.8 0.0018 E16.5 retina GCTTGCTTCC (2) 5.4 0.0054 E16.5 retina GCTTGCTTAC (5) 1.8 0.0018 E16.5 retina TTAATATAAT (2) 1.8 0.0018 E16.5 retina TTAATATATG (2) 1.8 0.0018 E18.5 retina GCTTGCTTCC (2) 14.6 0.0146 E18.5 retina GCTTGCTTAC (5) 3.6 0.0036 E18.5 retina GAAAGCTTAC (3) 1.8 0.0018 E18.5 retina TGGAGCAGGC (2) 1.8 0.0018 E18.5 retina TTAATATATG (2) 1.8 0.0018 P0.5 retina GCTTGCTTCC (2) 5.9 0.0059 P0.5 retina ATGCAGGGCA (3) 2 0.002 P0.5 retina GAAAGCTTAC (3) 2 0.002 P2.5 retina GCTTGCTTCC (2) 10.6 0.0106 P2.5 retina CAGATTTGGG (3) 1.8 0.0018 P2.5 retina TTAATATATG (2) 1.8 0.0018 P4.5 retina GCTTGCTTCC (2) 13.9 0.0139 P6.5 retina GCTTGCTTCC (2) 13.3 0.0133 P6.5 retina GAAAGCTTAC (3) 5 0.005 P6.5 retina ATGCAGGGCA (3) 1.7 0.0017 P10.5 crx- retina GCTTGCTTCC (2) 11.1 0.0111 P10.5 crx+ retina GCTTGCTTCC (2) 28.8 0.0288 P10.5 crx+ retina CCCACTGCAC (2) 1.9 0.0019 P10.5 crx+ retina TACTATAAGA (3) 1.9 0.0019 P10.5 crx+ retina TTAATATAAT (2) 1.9 0.0019 Adult retinal GCTTGCTTCC (2) 13 0.013 Adult retinal ATGCAGGGCA (3) 5.6 0.0056 Adult retinal CAGGTCTGGG (3) 1.9 0.0019 ONL GCTTGCTTCC (2) 1.9 0.0019