Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.341886	1110067M05Rik	RIKEN cDNA 1110067M05 gene	11		68851
Mm.341886	Thrap1	thyroid hormone receptor associated protein 1	11		327987
Mm.341886	2700033K15Rik	RIKEN cDNA 2700033K15 gene	11		72594
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 56 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTTACATCCG (3) 3.3 0.0033 P8 Cb GC AAGCCAAAAA (4) 1.6 0.0016 P8 Cb GC AAGCCTTAAA (3) 1.6 0.0016 P8 Cb GC ACAAACAATT (3) 1.6 0.0016 P8 Cb GC GAGGTGATGC (3) 1.6 0.0016 Cb medulloblastoma AAGCCTTCAA (3) 9.2 0.0092 Cb medulloblastoma AAGCAAAAAA (4) 2.3 0.0023 Cb medulloblastoma AAGCCTTAAA (3) 2.3 0.0023 Cb medulloblastoma TTAAAAAGAA (5) 2.3 0.0023 P8 GC+1d culture AAGCCTTCAA (3) 3.4 0.0034 P8 GC+1d culture AAGCAAAAAA (4) 2.3 0.0023 P8 GC+1d culture AAGCCTTAAA (3) 2.3 0.0023 P8 GC+1d culture ACAAACAATT (3) 1.1 0.0011 P8 GC+1d culture GCAGGAAGAG (3) 1.1 0.0011 P8 GC+1d culture TTAAAAAGAA (5) 1.1 0.0011 P8 GC+1d culture TTGAAAAGAA (4) 1.1 0.0011 P8 GC+SHH+1d culture AAGCCTTCAA (3) 2.3 0.0023 P8 GC+SHH+1d culture TTAAAAAGAA (5) 1.2 0.0012 3T3 fibroblasts AAGCCTTCAA (3) 3.5 0.0035 3T3 fibroblasts CTTACATCCG (3) 3.5 0.0035 E15 cortex CTTACATCCG (3) 4.9 0.0049 E12.5 retina AAGCCTTAAA (3) 1.9 0.0019 E12.5 retina GAGGTGATGC (3) 1.9 0.0019 E14.5 retina AAGCCTTAAA (3) 3.6 0.0036 E14.5 retina TTGAAAAGAA (4) 3.6 0.0036 E14.5 retina AAGCAAAAAA (4) 1.8 0.0018 E14.5 retina AAGCCTTCAA (3) 1.8 0.0018 E16.5 retina AAGCCTTCAA (3) 3.6 0.0036 E16.5 retina TTGAAAAGAA (4) 1.8 0.0018 E18.5 retina AAGCCTTCAA (3) 7.3 0.0073 E18.5 retina AAGCAAAAAA (4) 5.5 0.0055 E18.5 retina AAGCCTTAAA (3) 3.6 0.0036 E18.5 retina AAGCCAAAAA (4) 1.8 0.0018 P0.5 retina AAGCCTTCAA (3) 2 0.002 P2.5 retina AAGCCTTCAA (3) 5.3 0.0053 P2.5 retina AAGCAAAAAA (4) 3.5 0.0035 P2.5 retina AAGCCTTAAA (3) 3.5 0.0035 P2.5 retina AAGCCAAAAA (4) 1.8 0.0018 P4.5 retina AAGCCTTAAA (3) 4 0.004 P4.5 retina AAGCCTTCAA (3) 4 0.004 P4.5 retina GCAGGAAGAG (3) 2 0.002 P4.5 retina TTGAAAAGAA (4) 2 0.002 P6.5 retina AAGCCAAAAA (4) 1.7 0.0017 P6.5 retina AAGCCTTAAA (3) 1.7 0.0017 P6.5 retina AAGCCTTCAA (3) 1.7 0.0017 P6.5 retina TTGAAAAGAA (4) 1.7 0.0017 P10.5 crx- retina AAGCCTTAAA (3) 3.7 0.0037 P10.5 crx- retina ACAAACAATT (3) 1.9 0.0019 P10.5 crx+ retina AAGCCTTAAA (3) 1.9 0.0019 P10.5 crx+ retina AAGCCTTCAA (3) 1.9 0.0019 Adult retinal AAGCCTTCAA (3) 1.9 0.0019 Adult retinal GCAGGAAGAG (3) 1.9 0.0019 ONL AAGCCTTCAA (3) 9.6 0.0096 ONL AAGCCAAAAA (4) 5.7 0.0057 ONL GAGGTGATGC (3) 5.7 0.0057 ONL AAGCCTTAAA (3) 3.8 0.0038