Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.342177	Igh-6	immunoglobulin heavy chain 6 (heavy chain of IgM)	12	12 58.0 cM	16019
Mm.342177	Igh-VJ558	immunoglobulin heavy chain (J558 family)	12	12 59.0 cM	16061
Human Homolog	MGC27165[hypothetical protein MGC27165]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 49 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCTTGGCTTC (2) 22.8 0.0228 P8 Cb GC TACTACTGTA (3) 1.6 0.0016 Cb medulloblastoma TACTACTGTA (3) 6.9 0.0069 Cb medulloblastoma TATTACTGTA (2) 2.3 0.0023 P8 GC+1d culture TCTTGGCTTC (2) 67.4 0.0674 P8 GC+1d culture TATTACTGTA (2) 2.3 0.0023 P8 GC+1d culture GTGCCTGGTT (3) 1.1 0.0011 P8 GC+SHH+1d culture TCTTGGCTTC (2) 43.3 0.0433 P8 GC+SHH+1d culture TATTACTGTA (2) 2.3 0.0023 P8 GC+SHH+1d culture GGGTACATTA (3) 1.2 0.0012 P8 GC+SHH+1d culture GTGCCTGGTT (3) 1.2 0.0012 P8 GC+SHH+1d culture TACTACTGTA (3) 1.2 0.0012 P1 cortex TACTACTGTA (3) 9.1 0.0091 P1 cortex TCTTGGCTTC (2) 9.1 0.0091 P1 cortex TATTACTGTA (2) 4.5 0.0045 Hypothalamus GTGCCTGGTT (3) 1.8 0.0018 Hypothalamus TACTACTGTA (3) 1.8 0.0018 Hypothalamus TATTACTGTA (2) 1.8 0.0018 Hypothalamus TCTTGGCTTC (2) 1.8 0.0018 E12.5 retina TCTTGGCTTC (2) 1.9 0.0019 E14.5 retina TATTACTGTA (2) 3.6 0.0036 E14.5 retina TCTTGGCTTC (2) 3.6 0.0036 E16.5 retina TCTTGGCTTC (2) 5.4 0.0054 E18.5 retina TACTACTGTA (3) 1.8 0.0018 E18.5 retina TCTTGGCTTC (2) 1.8 0.0018 P0.5 retina TCTTGGCTTC (2) 3.9 0.0039 P0.5 retina TATTACTGTA (2) 2 0.002 P2.5 retina TCTTGGCTTC (2) 17.6 0.0176 P2.5 retina TATTACTGTA (2) 3.5 0.0035 P2.5 retina TACTACTGTA (3) 1.8 0.0018 P4.5 retina TCTTGGCTTC (2) 19.8 0.0198 P4.5 retina GGGTACATTA (3) 2 0.002 P4.5 retina TACTACTGTA (3) 2 0.002 P4.5 retina TATTACTGTA (2) 2 0.002 P6.5 retina TCTTGGCTTC (2) 33.3 0.0333 P6.5 retina TACTACTGTA (3) 3.3 0.0033 P6.5 retina TATTACTGTA (2) 1.7 0.0017 P10.5 crx- retina TCTTGGCTTC (2) 22.3 0.0223 P10.5 crx- retina TATTACTGTA (2) 3.7 0.0037 P10.5 crx- retina GGGTACATTA (3) 1.9 0.0019 P10.5 crx+ retina TCTTGGCTTC (2) 13.5 0.0135 P10.5 crx+ retina GGGTACATTA (3) 1.9 0.0019 P10.5 crx+ retina TACTACTGTA (3) 1.9 0.0019 P10.5 crx+ retina TATTACTGTA (2) 1.9 0.0019 Adult retinal TCTTGGCTTC (2) 5.6 0.0056 ONL TATTACTGTA (2) 3.8 0.0038 ONL GGATACATAA (2) 1.9 0.0019 ONL GGGTACATTA (3) 1.9 0.0019 ONL TCTTGGCTTC (2) 1.9 0.0019