Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.34520	0610037H22Rik	RIKEN cDNA 0610037H22 gene	16		66067
Human Homolog	HSPC135[HSPC135 protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 70 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCTTCATTTC (2) 11.4 0.0114 P8 Cb GC AAAACATCTC (3) 6.5 0.0065 P8 Cb GC CCTGCCTGGA 1.6 0.0016 P8 Cb GC CTGCTGATGT 1.6 0.0016 P8 Cb GC TGTTTATTTA (2) 1.6 0.0016 Cb medulloblastoma GCTTCATTTC (2) 9.2 0.0092 Cb medulloblastoma CCTGCCTGGA 6.9 0.0069 P8 GC+1d culture AAAACATCTC (3) 18.3 0.0183 P8 GC+1d culture GCTTCATTTC (2) 13.7 0.0137 P8 GC+1d culture CCTGCCTGGA 2.3 0.0023 P8 GC+1d culture CTGCTGATGT 1.1 0.0011 P8 GC+SHH+1d culture AAAACATCTC (3) 14.1 0.0141 P8 GC+SHH+1d culture GCTTCATTTC (2) 12.9 0.0129 P8 GC+SHH+1d culture TGTTTATTTA (2) 2.3 0.0023 P8 GC+SHH+1d culture CCTGCCTGGA 1.2 0.0012 P8 GC+SHH+1d culture GGCTGAGCCA 1.2 0.0012 3T3 fibroblasts GGCTGAGCCA 3.5 0.0035 E15 cortex CCTGCCTGGA 4.9 0.0049 E15 cortex GCTTCATTTC (2) 4.9 0.0049 P1 cortex AAAACATCTC (3) 4.5 0.0045 P1 cortex GGCTGAGCCA 4.5 0.0045 P1 cortex TGTTTATTTA (2) 4.5 0.0045 Hypothalamus AAAACATCTC (3) 7.2 0.0072 Hypothalamus GCTTCATTTC (2) 7.2 0.0072 Hypothalamus CCTGCCTGGA 1.8 0.0018 Hypothalamus CTGCTGATGT 1.8 0.0018 E12.5 retina AAAACATCTC (3) 54.4 0.0544 E12.5 retina GCTTCATTTC (2) 3.8 0.0038 E12.5 retina CTGCTGATGT 1.9 0.0019 E12.5 retina TGTTTATTTA (2) 1.9 0.0019 E14.5 retina AAAACATCTC (3) 10.9 0.0109 E14.5 retina GCTTCATTTC (2) 9.1 0.0091 E14.5 retina GTGCAGAAGG 3.6 0.0036 E14.5 retina CCTGCCTGGA 1.8 0.0018 E14.5 retina GGCTGAGCCA 1.8 0.0018 E14.5 retina TGTTTATTTA (2) 1.8 0.0018 E16.5 retina GCTTCATTTC (2) 14.5 0.0145 E16.5 retina AAAACATCTC (3) 7.2 0.0072 E16.5 retina CCTGCCTGGA 5.4 0.0054 E16.5 retina GGCTGAGCCA 1.8 0.0018 E18.5 retina AAAACATCTC (3) 7.3 0.0073 E18.5 retina GCTTCATTTC (2) 7.3 0.0073 P0.5 retina GCTTCATTTC (2) 7.9 0.0079 P0.5 retina AAAACATCTC (3) 5.9 0.0059 P0.5 retina CCTGCCTGGA 2 0.002 P2.5 retina AAAACATCTC (3) 10.6 0.0106 P2.5 retina CCTGCCTGGA 5.3 0.0053 P4.5 retina GCTTCATTTC (2) 11.9 0.0119 P4.5 retina GGCTGAGCCA 5.9 0.0059 P4.5 retina CCTGCCTGGA 4 0.004 P4.5 retina CTGCTGATGT 2 0.002 P4.5 retina TGTTTATTTA (2) 2 0.002 P6.5 retina AAAACATCTC (3) 11.7 0.0117 P6.5 retina CCTGCCTGGA 6.7 0.0067 P6.5 retina GCTTCATTTC (2) 5 0.005 P10.5 crx- retina AAAACATCTC (3) 48.3 0.0483 P10.5 crx- retina GCTTCATTTC (2) 11.1 0.0111 P10.5 crx- retina CCTGCCTGGA 3.7 0.0037 P10.5 crx- retina CTGCTGATGT 3.7 0.0037 P10.5 crx- retina GGCTGAGCCA 1.9 0.0019 P10.5 crx+ retina CCTGCCTGGA 5.8 0.0058 P10.5 crx+ retina AAAACATCTC (3) 3.8 0.0038 P10.5 crx+ retina GCTTCATTTC (2) 3.8 0.0038 P10.5 crx+ retina CTGCTGATGT 1.9 0.0019 Adult retinal AAAACATCTC (3) 5.6 0.0056 Adult retinal CCTGCCTGGA 3.7 0.0037 Adult retinal GGCTGAGCCA 1.9 0.0019 ONL CCTGCCTGGA 5.7 0.0057 ONL GCTTCATTTC (2) 3.8 0.0038 ONL GTGCAGAAGG 3.8 0.0038