Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.35059	AU014947	expressed sequence AU014947	2		99168
Mm.35059	Arhgap5	Rho GTPase activating protein 5	12	12 25.75 cM	11855
Gene Ontology	GTP binding | GTPase activator activity | membrane | regulation of cell size | Rho GTPase activator activity | Rho protein signal transduction | small GTPase mediated signal transduction
Human Homolog	ARHGAP5[Rho GTPase activating protein 5]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 42 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCTGGCAAAG (2) 4.9 0.0049 P8 Cb GC CTTGGGATGT (2) 3.3 0.0033 P8 Cb GC TGGCTTCCCA (3) 1.6 0.0016 Cb medulloblastoma TCTGGCAAAG (2) 23.1 0.0231 Cb medulloblastoma ACTGGAGAGG (2) 4.6 0.0046 Cb medulloblastoma ATTTTGAGAA (2) 4.6 0.0046 P8 GC+1d culture ACTGGAGAGG (2) 1.1 0.0011 P8 GC+1d culture TCATTGAACA (3) 1.1 0.0011 P8 GC+SHH+1d culture ATTTTGAGAA (2) 3.5 0.0035 P8 GC+SHH+1d culture TCTGGCAAAG (2) 2.3 0.0023 P8 GC+SHH+1d culture CCTTGAAAGA (2) 1.2 0.0012 P8 GC+SHH+1d culture TCATTGAACA (3) 1.2 0.0012 3T3 fibroblasts TCTGGCAAAG (2) 3.5 0.0035 E15 cortex TCTGGCAAAG (2) 9.9 0.0099 P1 cortex TCTGGCAAAG (2) 4.5 0.0045 Hypothalamus TCTGGCAAAG (2) 5.4 0.0054 Hypothalamus TCATTGAACA (3) 1.8 0.0018 E12.5 retina ATTTTGAGAA (2) 3.8 0.0038 E12.5 retina TCTGGCAAAG (2) 3.8 0.0038 E12.5 retina ACTGGAGAGG (2) 1.9 0.0019 E12.5 retina CCTTGAAAGA (2) 1.9 0.0019 E14.5 retina ATTTTGAGAA (2) 1.8 0.0018 E14.5 retina TGGCTTCCCA (3) 1.8 0.0018 E16.5 retina TGGCTTCCCA (3) 1.8 0.0018 E18.5 retina ATTTTGAGAA (2) 5.5 0.0055 E18.5 retina TCTGGCAAAG (2) 5.5 0.0055 E18.5 retina TGGCTTCCCA (3) 1.8 0.0018 P2.5 retina CTTGGGATGT (2) 1.8 0.0018 P4.5 retina TCTGGCAAAG (2) 4 0.004 P4.5 retina TGGCTTCCCA (3) 4 0.004 P6.5 retina ATTTTGAGAA (2) 3.3 0.0033 P6.5 retina TCTGGCAAAG (2) 1.7 0.0017 P10.5 crx- retina CCTTGAAAGA (2) 1.9 0.0019 P10.5 crx- retina TCTGGCAAAG (2) 1.9 0.0019 P10.5 crx+ retina TCTGGCAAAG (2) 3.8 0.0038 P10.5 crx+ retina ATTTTGAGAA (2) 1.9 0.0019 P10.5 crx+ retina CTTGGGATGT (2) 1.9 0.0019 Adult retinal TGGCTTCCCA (3) 9.3 0.0093 Adult retinal TCTGGCAAAG (2) 5.6 0.0056 ONL TGGCTTCCCA (3) 7.7 0.0077 ONL TCTGGCAAAG (2) 3.8 0.0038 ONL TCATTGAACA (3) 1.9 0.0019