Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3981	Cops6	COP9 (constitutive photomorphogenic) homolog, subunit 6 (Arabidopsis thaliana)	5	5 G2	26893
Gene Ontology	protein binding | signalosome complex
Human Homolog	COPS6[COP9 constitutive photomorphogenic homolog subunit 6 (Arabidopsis)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 34 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GACCTGAGTA (2) 9.8 0.0098 P8 Cb GC GTTGAAGGGA 1.6 0.0016 P8 Cb GC TCACAGCTCC 1.6 0.0016 Cb medulloblastoma GACCTGAGTA (2) 16.2 0.0162 Cb medulloblastoma GCCTACCTCG 2.3 0.0023 P8 GC+1d culture GACCTGAGTA (2) 17.1 0.0171 P8 GC+1d culture TCACAGCTCC 1.1 0.0011 P8 GC+SHH+1d culture GACCTGAGTA (2) 21.1 0.0211 P8 GC+SHH+1d culture CGCTCCCAGG 1.2 0.0012 P8 GC+SHH+1d culture TCACAGCTCC 1.2 0.0012 3T3 fibroblasts GACCTGAGTA (2) 14 0.014 E15 cortex GACCTGAGTA (2) 4.9 0.0049 E15 cortex GCCTACCTCG 4.9 0.0049 P1 cortex GACCTGAGTA (2) 4.5 0.0045 Hypothalamus GACCTGAGTA (2) 25.4 0.0254 E12.5 retina GACCTGAGTA (2) 31.9 0.0319 E12.5 retina TCACAGCTCC 1.9 0.0019 E14.5 retina GACCTGAGTA (2) 10.9 0.0109 E16.5 retina GACCTGAGTA (2) 19.9 0.0199 E16.5 retina CGCTCCCAGG 1.8 0.0018 E18.5 retina GACCTGAGTA (2) 34.6 0.0346 P0.5 retina GACCTGAGTA (2) 27.5 0.0275 P2.5 retina GACCTGAGTA (2) 21.1 0.0211 P4.5 retina GACCTGAGTA (2) 31.7 0.0317 P4.5 retina GTTGAAGGGA 2 0.002 P6.5 retina GACCTGAGTA (2) 13.3 0.0133 P6.5 retina GTTGAAGGGA 1.7 0.0017 P10.5 crx- retina GACCTGAGTA (2) 27.9 0.0279 P10.5 crx- retina TCACAGCTCC 3.7 0.0037 P10.5 crx- retina GTTGAAGGGA 1.9 0.0019 P10.5 crx+ retina GACCTGAGTA (2) 51.9 0.0519 Adult retinal GACCTGAGTA (2) 9.3 0.0093 Adult retinal GCCTACCTCG 1.9 0.0019 ONL GACCTGAGTA (2) 9.6 0.0096