Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.4149	Ncf1	neutrophil cytosolic factor 1	5	5 74.0 cM	17969
Gene Ontology	cell proliferation | cellular defense response (sensu Vertebrata) | cytosol | cytosol | inflammatory response | leukotriene metabolism | NADPH catabolism | response to bacteria | superoxide-generating NADPH oxidase activity | superoxide-generating NADPH oxidase activity | superoxide-generating NADPH oxidase activity
Human Homolog	NCF1[neutrophil cytosolic factor 1 (47kDa, chronic granulomatous disease, autosomal 1)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 34 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAAGTGTAAG (2) 6.5 0.0065 P8 Cb GC GAGGGGTGCT 1.6 0.0016 Cb medulloblastoma GAAGTGTAAG (2) 4.6 0.0046 P8 GC+1d culture GAAGTGTAAG (2) 2.3 0.0023 P8 GC+1d culture GAGGGGTGCT 1.1 0.0011 P8 GC+SHH+1d culture GAAGTGTAAG (2) 5.9 0.0059 P8 GC+SHH+1d culture GAGGGGTGCT 1.2 0.0012 3T3 fibroblasts GAAGTGTAAG (2) 3.5 0.0035 3T3 fibroblasts GAGGGGTGCT 3.5 0.0035 E15 cortex GAGGGGTGCT 14.8 0.0148 Hypothalamus GAAGTGTAAG (2) 1.8 0.0018 Hypothalamus GAGGGGTGCT 1.8 0.0018 E12.5 retina GAAGTGTAAG (2) 3.8 0.0038 E14.5 retina GAGGGGTGCT 5.5 0.0055 E14.5 retina GAAGTGTAAG (2) 3.6 0.0036 E16.5 retina GAGGGGTGCT 5.4 0.0054 E16.5 retina GAAGTGTAAG (2) 3.6 0.0036 E18.5 retina GAAGTGTAAG (2) 9.1 0.0091 E18.5 retina GAGGGGTGCT 1.8 0.0018 P0.5 retina GAGGGGTGCT 3.9 0.0039 P0.5 retina GAAGTGTAAG (2) 2 0.002 P2.5 retina GAAGTGTAAG (2) 14.1 0.0141 P2.5 retina GAGGGGTGCT 5.3 0.0053 P4.5 retina GAAGTGTAAG (2) 9.9 0.0099 P4.5 retina GAGGGGTGCT 2 0.002 P6.5 retina GAAGTGTAAG (2) 21.7 0.0217 P6.5 retina GAGGGGTGCT 1.7 0.0017 P10.5 crx- retina GAAGTGTAAG (2) 3.7 0.0037 P10.5 crx- retina GAGGGGTGCT 1.9 0.0019 P10.5 crx+ retina GAAGTGTAAG (2) 15.4 0.0154 P10.5 crx+ retina GAGGGGTGCT 1.9 0.0019 Adult retinal GAAGTGTAAG (2) 7.4 0.0074 ONL GAAGTGTAAG (2) 19.2 0.0192 ONL GAGGGGTGCT 1.9 0.0019