Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.4173	Mtap1b	microtubule-associated protein 1 B	13	13 51.0 cM	17755
Mm.4173	Ddx26	DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26	14		18130
Gene Ontology	ATP binding | ATP dependent helicase activity | extracellular space | nucleic acid binding
Human Homolog	DDX26[DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 82 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACCTTTTTAG (3) 8.2 0.0082 P8 Cb GC ACTTCAATAT (2) 6.5 0.0065 P8 Cb GC GAATTCAAAA (2) 4.9 0.0049 P8 Cb GC CGCCCGCCCG (2) 3.3 0.0033 P8 Cb GC AAACCAGAGC (2) 1.6 0.0016 Cb medulloblastoma CGCCCGCCCG (2) 4.6 0.0046 Cb medulloblastoma ACCTTTTTAG (3) 2.3 0.0023 Cb medulloblastoma AGGTAAAAGA (3) 2.3 0.0023 Cb medulloblastoma CACTCACGCA (2) 2.3 0.0023 Cb medulloblastoma GAATTCAAAA (2) 2.3 0.0023 P8 GC+1d culture CGCCCGCCCG (2) 29.7 0.0297 P8 GC+1d culture GAATTCAAAA (2) 4.6 0.0046 P8 GC+1d culture ACCTTTTTAG (3) 3.4 0.0034 P8 GC+1d culture CGGGAAAGCA (2) 3.4 0.0034 P8 GC+1d culture ACTTCAATAT (2) 1.1 0.0011 P8 GC+SHH+1d culture CGCCCGCCCG (2) 35.1 0.0351 P8 GC+SHH+1d culture ACCTTTTTAG (3) 4.7 0.0047 P8 GC+SHH+1d culture ACTTCAATAT (2) 4.7 0.0047 P8 GC+SHH+1d culture GTCAACATAG (2) 4.7 0.0047 P8 GC+SHH+1d culture CGGGAAAGCA (2) 1.2 0.0012 3T3 fibroblasts AAACCAGAGC (2) 3.5 0.0035 3T3 fibroblasts CGCCCGCCCG (2) 3.5 0.0035 E15 cortex CGCCCGCCCG (2) 188 0.188 E15 cortex AAACCAGAGC (2) 9.9 0.0099 E15 cortex CGGGAAAGCA (2) 4.9 0.0049 E15 cortex GAATTCAAAA (2) 4.9 0.0049 P1 cortex CGCCCGCCCG (2) 95.5 0.0955 P1 cortex ACTTCAATAT (2) 36.4 0.0364 P1 cortex AAACCAGAGC (2) 18.2 0.0182 P1 cortex CGGGAAAGCA (2) 4.5 0.0045 Hypothalamus ACTTCAATAT (2) 3.6 0.0036 Hypothalamus CGCCCGCCCG (2) 3.6 0.0036 Hypothalamus CGGGAAAGCA (2) 1.8 0.0018 E12.5 retina CGCCCGCCCG (2) 7.5 0.0075 E12.5 retina ACTTCAATAT (2) 5.6 0.0056 E12.5 retina AGGTAAAAGA (3) 3.8 0.0038 E12.5 retina CAGTCTACTT (2) 3.8 0.0038 E12.5 retina GTCAACATAG (2) 3.8 0.0038 E12.5 retina ACCTTTTTAG (3) 1.9 0.0019 E14.5 retina CGGGAAAGCA (2) 1.8 0.0018 E16.5 retina ACCTTTTTAG (3) 1.8 0.0018 E16.5 retina CACTCACGCA (2) 1.8 0.0018 E16.5 retina CGGGAAAGCA (2) 1.8 0.0018 E16.5 retina GTCAACATAG (2) 1.8 0.0018 E18.5 retina CGCCCGCCCG (2) 5.5 0.0055 E18.5 retina ACCTTTTTAG (3) 3.6 0.0036 P0.5 retina ACCTTTTTAG (3) 9.8 0.0098 P0.5 retina ACTTCAATAT (2) 3.9 0.0039 P0.5 retina CGCCCGCCCG (2) 3.9 0.0039 P2.5 retina CGCCCGCCCG (2) 8.8 0.0088 P2.5 retina ACCTTTTTAG (3) 5.3 0.0053 P2.5 retina GTCAACATAG (2) 5.3 0.0053 P2.5 retina ACTTCAATAT (2) 3.5 0.0035 P2.5 retina AGGTAAAAGA (3) 1.8 0.0018 P2.5 retina CACTCACGCA (2) 1.8 0.0018 P2.5 retina CGGGAAAGCA (2) 1.8 0.0018 P4.5 retina CGCCCGCCCG (2) 9.9 0.0099 P4.5 retina ACCTTTTTAG (3) 4 0.004 P4.5 retina ACTTCAATAT (2) 4 0.004 P4.5 retina CGGGAAAGCA (2) 2 0.002 P6.5 retina CGCCCGCCCG (2) 15 0.015 P6.5 retina ACCTTTTTAG (3) 6.7 0.0067 P6.5 retina CGGGAAAGCA (2) 3.3 0.0033 P6.5 retina GAATTCAAAA (2) 3.3 0.0033 P6.5 retina AAACCAGAGC (2) 1.7 0.0017 P10.5 crx- retina ACCTTTTTAG (3) 9.3 0.0093 P10.5 crx- retina CGCCCGCCCG (2) 5.6 0.0056 P10.5 crx- retina GAATTCAAAA (2) 1.9 0.0019 P10.5 crx- retina GTCAACATAG (2) 1.9 0.0019 P10.5 crx+ retina CGCCCGCCCG (2) 11.5 0.0115 P10.5 crx+ retina ACCTTTTTAG (3) 5.8 0.0058 Adult retinal CGCCCGCCCG (2) 22.2 0.0222 Adult retinal ACCTTTTTAG (3) 3.7 0.0037 Adult retinal AAACCAGAGC (2) 1.9 0.0019 Adult retinal ACTTCAATAT (2) 1.9 0.0019 Adult retinal CACTCACGCA (2) 1.9 0.0019 Adult retinal CAGTCTACTT (2) 1.9 0.0019 ONL CGCCCGCCCG (2) 11.5 0.0115 ONL CGGGAAAGCA (2) 7.7 0.0077 ONL ACCTTTTTAG (3) 3.8 0.0038 ONL ACTTCAATAT (2) 1.9 0.0019 ONL GTCAACATAG (2) 1.9 0.0019