Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.43358	2310056B04Rik	RIKEN cDNA 2310056B04 gene	1		70402
Mm.43358	Pbx1	pre B-cell leukemia transcription factor 1	1	1 88.1 cM	18514
Gene Ontology	adrenal gland development | C21-steroid hormone biosynthesis | carbon utilization by fixation of carbon dioxide | cytoplasm | cytoplasm | DNA binding | nucleus | organogenesis | protein binding | regulation of transcription, DNA-dependent | ribulose bisphosphate carboxylase complex | ribulose-bisphosphate carboxylase activity | sex differentiation | transcription factor activity | transcription factor complex | ureteric bud branching | urogenital system development
Human Homolog	PBX1[pre-B-cell leukemia transcription factor 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 64 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCCACTGTCA (3) 1.6 0.0016 Cb medulloblastoma CCCACTGTCA (3) 2.3 0.0023 Cb medulloblastoma TGTTAGGTTG (2) 2.3 0.0023 P8 GC+1d culture TGGTTGGACA (2) 6.8 0.0068 P8 GC+1d culture CCCACTGTCA (3) 1.1 0.0011 P8 GC+1d culture GAAGCAGCCT (2) 1.1 0.0011 P8 GC+1d culture TGTTAGGTTG (2) 1.1 0.0011 P8 GC+1d culture TTTATTAATT (2) 1.1 0.0011 P8 GC+SHH+1d culture TGTTAGGTTG (2) 4.7 0.0047 P8 GC+SHH+1d culture TGGTTGGACA (2) 3.5 0.0035 P8 GC+SHH+1d culture CCCACTGTCA (3) 1.2 0.0012 P8 GC+SHH+1d culture CTGCTAGCAG (3) 1.2 0.0012 P8 GC+SHH+1d culture GAAGCAGCCT (2) 1.2 0.0012 P8 GC+SHH+1d culture TTATCAGCCA (2) 1.2 0.0012 3T3 fibroblasts CCCACTGTCA (3) 3.5 0.0035 3T3 fibroblasts TGGTTGGACA (2) 3.5 0.0035 3T3 fibroblasts TGTTAGGTTG (2) 3.5 0.0035 E15 cortex CCCACTGTCA (3) 4.9 0.0049 E15 cortex TGGTTGGACA (2) 4.9 0.0049 E15 cortex TGTTAGGTTG (2) 4.9 0.0049 P1 cortex CCCACTGTCA (3) 4.5 0.0045 P1 cortex TGGTTGGACA (2) 4.5 0.0045 Hypothalamus TGTTAGGTTG (2) 3.6 0.0036 Hypothalamus CCCACTGTCA (3) 1.8 0.0018 Hypothalamus CTGCTAGCAG (3) 1.8 0.0018 Hypothalamus GAAGCAGCCT (2) 1.8 0.0018 Hypothalamus GCTGCTTTCT (3) 1.8 0.0018 E12.5 retina TGGTTGGACA (2) 1.9 0.0019 E12.5 retina TGTTAGGTTG (2) 1.9 0.0019 E12.5 retina TTATCAGCCA (2) 1.9 0.0019 E14.5 retina AGAGTGTTTC (2) 3.6 0.0036 E14.5 retina TGGTTGGACA (2) 3.6 0.0036 E14.5 retina TGTTAGGTTG (2) 3.6 0.0036 E14.5 retina TTTATTAATT (2) 1.8 0.0018 E16.5 retina CTGCTAGCAG (3) 3.6 0.0036 E16.5 retina TGGTTGGACA (2) 1.8 0.0018 E18.5 retina GAAGCAGCCT (2) 1.8 0.0018 E18.5 retina TGGTTGGACA (2) 1.8 0.0018 E18.5 retina TTTATTAATT (2) 1.8 0.0018 P0.5 retina CCCACTGTCA (3) 3.9 0.0039 P0.5 retina TGGTTGGACA (2) 3.9 0.0039 P0.5 retina GAAGCAGCCT (2) 2 0.002 P2.5 retina CCCACTGTCA (3) 1.8 0.0018 P2.5 retina TGGTTGGACA (2) 1.8 0.0018 P2.5 retina TTTATTAATT (2) 1.8 0.0018 P4.5 retina CCCACTGTCA (3) 4 0.004 P4.5 retina GAAGCAGCCT (2) 2 0.002 P4.5 retina TGGTTGGACA (2) 2 0.002 P4.5 retina TTTATTAATT (2) 2 0.002 P6.5 retina CCCACTGTCA (3) 3.3 0.0033 P6.5 retina TTTATTAATT (2) 3.3 0.0033 P6.5 retina CTGCTAGCAG (3) 1.7 0.0017 P6.5 retina GAAGCAGCCT (2) 1.7 0.0017 P6.5 retina TGTTAGGTTG (2) 1.7 0.0017 P10.5 crx- retina CCCACTGTCA (3) 3.7 0.0037 P10.5 crx- retina AGAGTGTTTC (2) 1.9 0.0019 P10.5 crx+ retina CCCACTGTCA (3) 3.8 0.0038 P10.5 crx+ retina TGGTTGGACA (2) 3.8 0.0038 Adult retinal CCCACTGTCA (3) 9.3 0.0093 Adult retinal TGTTAGGTTG (2) 3.7 0.0037 Adult retinal TGGTTGGACA (2) 1.9 0.0019 Adult retinal TTATCAGCCA (2) 1.9 0.0019 ONL TGGTTGGACA (2) 3.8 0.0038 ONL TTTATTAATT (2) 1.9 0.0019