Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.4871	Timp3	tissue inhibitor of metalloproteinase 3	10	10 C1-D1 (10 47.0 cM)	21859
Mm.4871	B930095M22Rik	RIKEN cDNA B930095M22 gene	10		320124
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 6 In Situ Hybridization Images

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SAGE Tags

Total 35 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGTAGGCTGT (2) 11.4 0.0114 P8 Cb GC TTATTTATGA (2) 3.3 0.0033 P8 Cb GC ATTGGTTACT (2) 1.6 0.0016 P8 Cb GC CACACACAGG (5) 1.6 0.0016 P8 Cb GC CCATTTTTTT (3) 1.6 0.0016 Cb medulloblastoma CACACACAGG (5) 2.3 0.0023 Cb medulloblastoma GGAATAAAAG (3) 2.3 0.0023 Cb medulloblastoma TGTAGGCTGT (2) 2.3 0.0023 P8 GC+1d culture TTATTTATGA (2) 10.3 0.0103 P8 GC+1d culture TGTAGGCTGT (2) 2.3 0.0023 P8 GC+1d culture TTGTGCTTCT (2) 1.1 0.0011 P8 GC+SHH+1d culture ATTGGTTACT (2) 2.3 0.0023 P8 GC+SHH+1d culture TGTAGGCTGT (2) 2.3 0.0023 P8 GC+SHH+1d culture TTATTTATGA (2) 2.3 0.0023 P8 GC+SHH+1d culture CACACACAGG (5) 1.2 0.0012 P8 GC+SHH+1d culture TTGTGCTTCT (2) 1.2 0.0012 3T3 fibroblasts TTGTGCTTCT (2) 7 0.007 3T3 fibroblasts TGTAGGCTGT (2) 3.5 0.0035 Hypothalamus TTATTTATGA (2) 5.4 0.0054 Hypothalamus GGAATAAAAG (3) 1.8 0.0018 Hypothalamus TGTAGGCTGT (2) 1.8 0.0018 E12.5 retina TTATTTATGA (2) 1.9 0.0019 E14.5 retina CACACACAGG (5) 1.8 0.0018 E16.5 retina CACACACAGG (5) 1.8 0.0018 E18.5 retina CACACACAGG (5) 1.8 0.0018 E18.5 retina CCATTTTTTT (3) 1.8 0.0018 P0.5 retina TTATTTATGA (2) 3.9 0.0039 P0.5 retina GGAATAAAAG (3) 2 0.002 P4.5 retina CCATTTTTTT (3) 2 0.002 P4.5 retina TGTAGGCTGT (2) 2 0.002 P10.5 crx- retina TGTAGGCTGT (2) 1.9 0.0019 P10.5 crx+ retina TGTAGGCTGT (2) 1.9 0.0019 Adult retinal CCATTTTTTT (3) 1.9 0.0019 Adult retinal TGTAGGCTGT (2) 1.9 0.0019 Adult retinal TTATTTATGA (2) 1.9 0.0019