Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.69739
Ttc19
tetratricopeptide repeat domain 19
11
72795
Mm.69739
2010204O13Rik
RIKEN cDNA 2010204O13 gene
11
76693
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 64 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAGCAGGAAG
(
3
)
13.1
0.0131
P8 Cb GC
GGTATGTTAT
(
5
)
4.9
0.0049
P8 Cb GC
TGTTTGTTCT
(
2
)
4.9
0.0049
P8 Cb GC
GTCTAGTTTA
(
2
)
3.3
0.0033
Cb medulloblastoma
AAGCAGGAAG
(
3
)
9.2
0.0092
Cb medulloblastoma
GTCTAGTTTA
(
2
)
4.6
0.0046
Cb medulloblastoma
GGTATGTTAT
(
5
)
2.3
0.0023
P8 GC+1d culture
GGTATGTTAT
(
5
)
2.3
0.0023
P8 GC+1d culture
AAGCAGGAAG
(
3
)
1.1
0.0011
P8 GC+1d culture
CTCATCTGAG
(
4
)
1.1
0.0011
P8 GC+1d culture
TGTTTGTTCT
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
GTCTAGTTTA
(
2
)
7
0.007
P8 GC+SHH+1d culture
GGTATGTTAT
(
5
)
2.3
0.0023
P8 GC+SHH+1d culture
AAGCAGGAAG
(
3
)
1.2
0.0012
P8 GC+SHH+1d culture
TTGTGTTGTC
(
3
)
1.2
0.0012
3T3 fibroblasts
AAGCAGGAAG
(
3
)
7
0.007
P1 cortex
AAGCAGGAAG
(
3
)
4.5
0.0045
P1 cortex
TGTTTGTTCT
(
2
)
4.5
0.0045
Hypothalamus
AAGCAGGAAG
(
3
)
7.2
0.0072
Hypothalamus
TGCTCAGGGT
(
2
)
1.8
0.0018
Hypothalamus
TTGTGTTGTC
(
3
)
1.8
0.0018
E12.5 retina
AAGCAGGAAG
(
3
)
18.8
0.0188
E12.5 retina
GTCTAGTTTA
(
2
)
3.8
0.0038
E12.5 retina
GGTATGTTAT
(
5
)
1.9
0.0019
E14.5 retina
AAGCAGGAAG
(
3
)
16.4
0.0164
E14.5 retina
GTCTAGTTTA
(
2
)
1.8
0.0018
E14.5 retina
TGTTTGTTCT
(
2
)
1.8
0.0018
E16.5 retina
AAGCAGGAAG
(
3
)
7.2
0.0072
E16.5 retina
GGTATGTTAT
(
5
)
3.6
0.0036
E16.5 retina
CTCATCTGAG
(
4
)
1.8
0.0018
E16.5 retina
GTCTAGTTTA
(
2
)
1.8
0.0018
E16.5 retina
TTGTGTTGTC
(
3
)
1.8
0.0018
E18.5 retina
AAGCAGGAAG
(
3
)
3.6
0.0036
E18.5 retina
GGTATGTTAT
(
5
)
1.8
0.0018
E18.5 retina
GTCTAGTTTA
(
2
)
1.8
0.0018
E18.5 retina
TGTTTGTTCT
(
2
)
1.8
0.0018
P0.5 retina
AAGCAGGAAG
(
3
)
7.9
0.0079
P0.5 retina
GTCTAGTTTA
(
2
)
5.9
0.0059
P0.5 retina
GGTATGTTAT
(
5
)
2
0.002
P2.5 retina
AAGCAGGAAG
(
3
)
3.5
0.0035
P2.5 retina
GGTATGTTAT
(
5
)
3.5
0.0035
P4.5 retina
AAGCAGGAAG
(
3
)
7.9
0.0079
P4.5 retina
GGTATGTTAT
(
5
)
5.9
0.0059
P4.5 retina
TGTTTGTTCT
(
2
)
4
0.004
P4.5 retina
CTCATCTGAG
(
4
)
2
0.002
P4.5 retina
GTCTAGTTTA
(
2
)
2
0.002
P6.5 retina
AAGCAGGAAG
(
3
)
5
0.005
P6.5 retina
GTCTAGTTTA
(
2
)
5
0.005
P6.5 retina
GGTATGTTAT
(
5
)
3.3
0.0033
P6.5 retina
TGTTTGTTCT
(
2
)
1.7
0.0017
P10.5 crx- retina
AAGCAGGAAG
(
3
)
22.3
0.0223
P10.5 crx- retina
GGTATGTTAT
(
5
)
3.7
0.0037
P10.5 crx- retina
GTCTAGTTTA
(
2
)
1.9
0.0019
P10.5 crx- retina
TGTTTGTTCT
(
2
)
1.9
0.0019
P10.5 crx+ retina
AAGCAGGAAG
(
3
)
5.8
0.0058
P10.5 crx+ retina
TGCTCAGGGT
(
2
)
1.9
0.0019
P10.5 crx+ retina
TGTTTGTTCT
(
2
)
1.9
0.0019
Adult retinal
AAGCAGGAAG
(
3
)
3.7
0.0037
Adult retinal
TGTTTGTTCT
(
2
)
3.7
0.0037
Adult retinal
GGTATGTTAT
(
5
)
1.9
0.0019
Adult retinal
GTCTAGTTTA
(
2
)
1.9
0.0019
ONL
AAGCAGGAAG
(
3
)
3.8
0.0038
ONL
CTCATCTGAG
(
4
)
1.9
0.0019
ONL
TGCTCAGGGT
(
2
)
1.9
0.0019
