Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.7087	AA536951	expressed sequence AA536951	14		105431
Mm.7087	Rabep1	rabaptin, RAB GTPase binding effector protein 1	11	11 42.0 cM	54189
Gene Ontology	apoptosis | endocytosis | endosome | growth factor activity | GTPase activator activity | protein transport | transport
Human Homolog	RABEP1[rabaptin, RAB GTPase binding effector protein 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 46 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCAAGCAAAA (3) 6.5 0.0065 P8 Cb GC CCCTTAAGAA (4) 3.3 0.0033 P8 Cb GC GCGCAGCCGG (2) 1.6 0.0016 Cb medulloblastoma CCCTTAAGAA (4) 6.9 0.0069 Cb medulloblastoma GCAAGCAAAA (3) 6.9 0.0069 Cb medulloblastoma GCGCAGCCGG (2) 2.3 0.0023 P8 GC+1d culture GCAAGCAAAA (3) 3.4 0.0034 P8 GC+1d culture CCCTTAAGAA (4) 2.3 0.0023 P8 GC+SHH+1d culture GCAAGCAAAA (3) 11.7 0.0117 P8 GC+SHH+1d culture AAAGCAACTT (2) 2.3 0.0023 P8 GC+SHH+1d culture CCCTTAAGAA (4) 1.2 0.0012 3T3 fibroblasts GCAAGCAAAA (3) 3.5 0.0035 P1 cortex AGCTCACTCC (2) 4.5 0.0045 P1 cortex CCCTTAAGAA (4) 4.5 0.0045 P1 cortex GCAAGCAAAA (3) 4.5 0.0045 Hypothalamus GCAAGCAAAA (3) 7.2 0.0072 Hypothalamus AGCTCACTCC (2) 1.8 0.0018 Hypothalamus TTTGAAGAGA (3) 1.8 0.0018 E12.5 retina GCAAGCAAAA (3) 13.1 0.0131 E12.5 retina TTTGAAGAGA (3) 1.9 0.0019 E14.5 retina GCAAGCAAAA (3) 10.9 0.0109 E14.5 retina CCCTTAAGAA (4) 1.8 0.0018 E14.5 retina GCGCAGCCGG (2) 1.8 0.0018 E14.5 retina TTTGAAGAGA (3) 1.8 0.0018 E16.5 retina GCAAGCAAAA (3) 12.7 0.0127 E16.5 retina CCCTTAAGAA (4) 3.6 0.0036 E18.5 retina GCAAGCAAAA (3) 32.7 0.0327 E18.5 retina GCGCAGCCGG (2) 1.8 0.0018 P0.5 retina CCCTTAAGAA (4) 5.9 0.0059 P0.5 retina GCAAGCAAAA (3) 3.9 0.0039 P0.5 retina AGCTCACTCC (2) 2 0.002 P2.5 retina GCAAGCAAAA (3) 7 0.007 P2.5 retina AAAGCAACTT (2) 3.5 0.0035 P2.5 retina CCCTTAAGAA (4) 1.8 0.0018 P4.5 retina GCAAGCAAAA (3) 7.9 0.0079 P4.5 retina CCCTTAAGAA (4) 2 0.002 P6.5 retina GCAAGCAAAA (3) 10 0.01 P6.5 retina AAAGCAACTT (2) 5 0.005 P6.5 retina CCCTTAAGAA (4) 5 0.005 P10.5 crx- retina GCAAGCAAAA (3) 1.9 0.0019 P10.5 crx+ retina GCAAGCAAAA (3) 7.7 0.0077 P10.5 crx+ retina CCCTTAAGAA (4) 1.9 0.0019 P10.5 crx+ retina GCGCAGCCGG (2) 1.9 0.0019 Adult retinal CCCTTAAGAA (4) 3.7 0.0037 Adult retinal GCAAGCAAAA (3) 3.7 0.0037 ONL AGCTCACTCC (2) 1.9 0.0019