Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.8687	Cap1	CAP, adenylate cyclase-associated protein 1 (yeast)	4		12331
Gene Ontology	actin cytoskeleton organization and biogenesis | ameboid cell migration | cellular morphogenesis | cortical actin cytoskeleton | cytoplasm | membrane | receptor mediated endocytosis
Human Homolog	CAP1[CAP, adenylate cyclase-associated protein 1 (yeast)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 56 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGGAACAACT 4.9 0.0049 P8 Cb GC AAAGCACCAT (2) 1.6 0.0016 P8 Cb GC GGGGGCAGGA 1.6 0.0016 P8 Cb GC TGGACTGGTC (2) 1.6 0.0016 Cb medulloblastoma AAAGCACCAT (2) 6.9 0.0069 Cb medulloblastoma CATCACCACA (2) 4.6 0.0046 Cb medulloblastoma GGATACATCT 2.3 0.0023 Cb medulloblastoma GGGAACAACT 2.3 0.0023 P8 GC+1d culture CATCACCACA (2) 5.7 0.0057 P8 GC+1d culture AAAGCACCAT (2) 1.1 0.0011 P8 GC+1d culture GGGAACAACT 1.1 0.0011 P8 GC+1d culture TGGACTGGTC (2) 1.1 0.0011 P8 GC+SHH+1d culture GGGAACAACT 5.9 0.0059 P8 GC+SHH+1d culture AAAGCACCAT (2) 2.3 0.0023 P8 GC+SHH+1d culture CATCACCACA (2) 2.3 0.0023 3T3 fibroblasts GGGAACAACT 7 0.007 3T3 fibroblasts GGATACATCT 3.5 0.0035 Hypothalamus AAAGCACCAT (2) 5.4 0.0054 Hypothalamus CATCACCACA (2) 1.8 0.0018 Hypothalamus GGGGGCAGGA 1.8 0.0018 E12.5 retina AAAGCACCAT (2) 3.8 0.0038 E12.5 retina AAGACTCACA (2) 1.9 0.0019 E12.5 retina CATCACCACA (2) 1.9 0.0019 E12.5 retina GGATACATCT 1.9 0.0019 E12.5 retina GGGAACAACT 1.9 0.0019 E14.5 retina AAAGCACCAT (2) 1.8 0.0018 E14.5 retina AAGACTCACA (2) 1.8 0.0018 E14.5 retina CATCACCACA (2) 1.8 0.0018 E16.5 retina AAAGCACCAT (2) 1.8 0.0018 E16.5 retina CATCACCACA (2) 1.8 0.0018 E18.5 retina GCCAAGTGTA 3.6 0.0036 E18.5 retina GGGAACAACT 1.8 0.0018 P0.5 retina AAGACTCACA (2) 2 0.002 P0.5 retina GCCAAGTGTA 2 0.002 P0.5 retina GGATACATCT 2 0.002 P0.5 retina GGGAACAACT 2 0.002 P0.5 retina TGGACTGGTC (2) 2 0.002 P2.5 retina AAAGCACCAT (2) 1.8 0.0018 P4.5 retina AAGACTCACA (2) 2 0.002 P4.5 retina CATCACCACA (2) 2 0.002 P4.5 retina GGGAACAACT 2 0.002 P6.5 retina GGGAACAACT 1.7 0.0017 P6.5 retina TGGACTGGTC (2) 1.7 0.0017 P10.5 crx- retina AAAGCACCAT (2) 9.3 0.0093 P10.5 crx- retina CATCACCACA (2) 5.6 0.0056 P10.5 crx- retina GCCAAGTGTA 1.9 0.0019 P10.5 crx+ retina AAGACTCACA (2) 3.8 0.0038 P10.5 crx+ retina AAAGCACCAT (2) 1.9 0.0019 P10.5 crx+ retina CATCACCACA (2) 1.9 0.0019 Adult retinal AAGACTCACA (2) 1.9 0.0019 Adult retinal CATCACCACA (2) 1.9 0.0019 Adult retinal GGGGGCAGGA 1.9 0.0019 ONL AAGACTCACA (2) 3.8 0.0038 ONL AAAGCACCAT (2) 1.9 0.0019 ONL CATCACCACA (2) 1.9 0.0019 ONL GGGAACAACT 1.9 0.0019