Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.87611
Cul1
cullin 1
6
6 B3
26965
Mm.87611
AW743318
expressed sequence AW743318
6
101402
Mm.87611
A930035D04Rik
RIKEN cDNA A930035D04 gene
6
320946
Mm.87611
9430013L14Rik
RIKEN cDNA 9430013L14 gene
6
77241
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
Total 10 In Situ Hybridization Images
Images -- Click to Enlarge
SAGE Tags
Total 47 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CTACCGCACT
(
4
)
6.5
0.0065
Cb medulloblastoma
CTACCGCACT
(
4
)
2.3
0.0023
Cb medulloblastoma
GCCTCTGCTT
(
5
)
2.3
0.0023
P8 GC+1d culture
CTACCGCACT
(
4
)
6.8
0.0068
P8 GC+1d culture
GACTGAAGCA
(
4
)
1.1
0.0011
P8 GC+1d culture
GAGAGATGTT
(
4
)
1.1
0.0011
P8 GC+1d culture
GCCTCTGCTT
(
5
)
1.1
0.0011
P8 GC+SHH+1d culture
CTACCGCACT
(
4
)
10.5
0.0105
P8 GC+SHH+1d culture
GACTGAAGCA
(
4
)
2.3
0.0023
P8 GC+SHH+1d culture
GAAGGTTCGG
(
4
)
1.2
0.0012
P8 GC+SHH+1d culture
GCCTCTGCTT
(
5
)
1.2
0.0012
3T3 fibroblasts
CTACCGCACT
(
4
)
17.5
0.0175
E15 cortex
CTACCGCACT
(
4
)
14.8
0.0148
P1 cortex
GACTGAAGCA
(
4
)
4.5
0.0045
P1 cortex
GAGAGATGTT
(
4
)
4.5
0.0045
P1 cortex
GCCTCTGCTT
(
5
)
4.5
0.0045
Hypothalamus
CTACCGCACT
(
4
)
1.8
0.0018
Hypothalamus
GAAGGTTCGG
(
4
)
1.8
0.0018
E12.5 retina
CTACCGCACT
(
4
)
7.5
0.0075
E14.5 retina
CTACCGCACT
(
4
)
10.9
0.0109
E14.5 retina
GCCTCTGCTT
(
5
)
5.5
0.0055
E14.5 retina
GAGAGATGTT
(
4
)
1.8
0.0018
E16.5 retina
GCCTCTGCTT
(
5
)
3.6
0.0036
E16.5 retina
CTACCGCACT
(
4
)
1.8
0.0018
E18.5 retina
CTACCGCACT
(
4
)
3.6
0.0036
E18.5 retina
TATTCATAGA
(
4
)
1.8
0.0018
P0.5 retina
CTACCGCACT
(
4
)
21.6
0.0216
P2.5 retina
CTACCGCACT
(
4
)
5.3
0.0053
P2.5 retina
GCCTCTGCTT
(
5
)
1.8
0.0018
P4.5 retina
CATTTGTACA
(
4
)
2
0.002
P4.5 retina
CTACCGCACT
(
4
)
2
0.002
P4.5 retina
GAAGGTTCGG
(
4
)
2
0.002
P6.5 retina
CTACCGCACT
(
4
)
8.3
0.0083
P6.5 retina
CATTTGTACA
(
4
)
3.3
0.0033
P6.5 retina
GCCTCTGCTT
(
5
)
1.7
0.0017
P10.5 crx- retina
CTACCGCACT
(
4
)
20.4
0.0204
P10.5 crx- retina
GCCTCTGCTT
(
5
)
9.3
0.0093
P10.5 crx- retina
TATTCATAGA
(
4
)
1.9
0.0019
P10.5 crx+ retina
GCCTCTGCTT
(
5
)
13.5
0.0135
P10.5 crx+ retina
CTACCGCACT
(
4
)
5.8
0.0058
P10.5 crx+ retina
GAAGGTTCGG
(
4
)
1.9
0.0019
Adult retinal
CTACCGCACT
(
4
)
11.1
0.0111
Adult retinal
GCCTCTGCTT
(
5
)
5.6
0.0056
Adult retinal
GAGAGATGTT
(
4
)
1.9
0.0019
ONL
CTACCGCACT
(
4
)
5.7
0.0057
ONL
GCCTCTGCTT
(
5
)
5.7
0.0057
ONL
TATTCATAGA
(
4
)
1.9
0.0019
