Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.87773
Tra1
tumor rejection antigen gp96
10
10 49.0 cM
22027
Mm.87773
Targ2
transforming growth factor alpha regulated gene 2
21361
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 68 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGTATAAAAA
(
3
)
27.7
0.0277
P8 Cb GC
AATTCTCTGT
(
4
)
8.2
0.0082
P8 Cb GC
ACAAGATTTT
(
2
)
8.2
0.0082
P8 Cb GC
GATCTTGCTG
(
3
)
3.3
0.0033
P8 Cb GC
GCTGGGTCAA
(
2
)
3.3
0.0033
P8 Cb GC
TCACAGACAC
(
2
)
3.3
0.0033
P8 Cb GC
AGGGTCCTGT
(
2
)
1.6
0.0016
P8 Cb GC
GGTATAAAAA
(
2
)
1.6
0.0016
Cb medulloblastoma
TGTATAAAAA
(
3
)
50.9
0.0509
Cb medulloblastoma
ACAAGATTTT
(
2
)
2.3
0.0023
P8 GC+1d culture
TGTATAAAAA
(
3
)
45.7
0.0457
P8 GC+1d culture
ACAAGATTTT
(
2
)
2.3
0.0023
P8 GC+1d culture
AATTCTCTGT
(
4
)
1.1
0.0011
P8 GC+1d culture
GATCTTGCTG
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
TGTATAAAAA
(
3
)
72.6
0.0726
P8 GC+SHH+1d culture
ACAAGATTTT
(
2
)
7
0.007
P8 GC+SHH+1d culture
AATTCTCTGT
(
4
)
3.5
0.0035
P8 GC+SHH+1d culture
GATCTTGCTG
(
3
)
1.2
0.0012
3T3 fibroblasts
TCACAGACAC
(
2
)
49.1
0.0491
3T3 fibroblasts
AGGGTCCTGT
(
2
)
7
0.007
E15 cortex
AATTCTCTGT
(
4
)
9.9
0.0099
E15 cortex
TGTATAAAAA
(
3
)
9.9
0.0099
E15 cortex
TCACAGACAC
(
2
)
4.9
0.0049
P1 cortex
TGTATAAAAA
(
3
)
145.4
0.1454
P1 cortex
ACAAGATTTT
(
2
)
22.7
0.0227
P1 cortex
AATTCTCTGT
(
4
)
9.1
0.0091
Hypothalamus
TGTATAAAAA
(
3
)
77.9
0.0779
Hypothalamus
ACAAGATTTT
(
2
)
1.8
0.0018
Hypothalamus
GATCTTGCTG
(
3
)
1.8
0.0018
E12.5 retina
TGTATAAAAA
(
3
)
26.3
0.0263
E12.5 retina
AATTCTCTGT
(
4
)
1.9
0.0019
E12.5 retina
ACAAGATTTT
(
2
)
1.9
0.0019
E12.5 retina
TCACAGACAC
(
2
)
1.9
0.0019
E14.5 retina
TGTATAAAAA
(
3
)
51
0.051
E14.5 retina
ACAAGATTTT
(
2
)
5.5
0.0055
E14.5 retina
TCACAGACAC
(
2
)
1.8
0.0018
E16.5 retina
TGTATAAAAA
(
3
)
56.1
0.0561
E16.5 retina
GCTGGGTCAA
(
2
)
3.6
0.0036
E16.5 retina
ACAAGATTTT
(
2
)
1.8
0.0018
E18.5 retina
TGTATAAAAA
(
3
)
111
0.111
E18.5 retina
ACAAGATTTT
(
2
)
5.5
0.0055
E18.5 retina
AGGGTCTGTG
(
2
)
3.6
0.0036
P0.5 retina
TGTATAAAAA
(
3
)
25.5
0.0255
P0.5 retina
ACAAGATTTT
(
2
)
13.7
0.0137
P0.5 retina
GATCTTGCTG
(
3
)
2
0.002
P2.5 retina
TGTATAAAAA
(
3
)
42.2
0.0422
P2.5 retina
TCACAGACAC
(
2
)
1.8
0.0018
P4.5 retina
TGTATAAAAA
(
3
)
69.3
0.0693
P4.5 retina
ACAAGATTTT
(
2
)
4
0.004
P6.5 retina
TGTATAAAAA
(
3
)
76.7
0.0767
P6.5 retina
AATTCTCTGT
(
4
)
1.7
0.0017
P6.5 retina
GATCTTGCTG
(
3
)
1.7
0.0017
P6.5 retina
GGTATAAAAA
(
2
)
1.7
0.0017
P6.5 retina
TCACAGACAC
(
2
)
1.7
0.0017
P10.5 crx- retina
TGTATAAAAA
(
3
)
31.6
0.0316
P10.5 crx- retina
GATCTTGCTG
(
3
)
7.4
0.0074
P10.5 crx- retina
AGGGTCTGTG
(
2
)
1.9
0.0019
P10.5 crx- retina
TCACAGACAC
(
2
)
1.9
0.0019
P10.5 crx+ retina
TGTATAAAAA
(
3
)
53.8
0.0538
P10.5 crx+ retina
ACAAGATTTT
(
2
)
5.8
0.0058
P10.5 crx+ retina
GATCTTGCTG
(
3
)
1.9
0.0019
P10.5 crx+ retina
GCTGGGTCAA
(
2
)
1.9
0.0019
Adult retinal
TGTATAAAAA
(
3
)
20.4
0.0204
Adult retinal
ACAAGATTTT
(
2
)
1.9
0.0019
Adult retinal
GGTATAAAAA
(
2
)
1.9
0.0019
ONL
TGTATAAAAA
(
3
)
26.8
0.0268
ONL
ACAAGATTTT
(
2
)
3.8
0.0038
ONL
TCACAGACAC
(
2
)
1.9
0.0019
