Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.8924	AU022875	expressed sequence AU022875	16		106342
Mm.8924	A130034M23Rik	RIKEN cDNA A130034M23 gene	16		320759
Mm.8924	Gm542	gene model 542, (NCBI)	16		224087
Human Homolog	AFURS1[ATPase family homolog up-regulated in senescence cells]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 37 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAATTAATAA (5) 1.6 0.0016 P8 Cb GC CACTGTTGAG (4) 1.6 0.0016 P8 Cb GC GGAAACAAAA (3) 1.6 0.0016 Cb medulloblastoma GGTCCTGCTT (3) 4.6 0.0046 Cb medulloblastoma CACTGTTGAG (4) 2.3 0.0023 Cb medulloblastoma CAGTTTTGTT (3) 2.3 0.0023 Cb medulloblastoma GGAAACAAAA (3) 2.3 0.0023 P8 GC+1d culture CACTGTTGAG (4) 11.4 0.0114 P8 GC+1d culture AAATTAATAA (5) 1.1 0.0011 P8 GC+SHH+1d culture CACTGTTGAG (4) 8.2 0.0082 P8 GC+SHH+1d culture GGTCCTGCTT (3) 1.2 0.0012 3T3 fibroblasts GGTCCTGCTT (3) 7 0.007 E15 cortex CACTGTTGAG (4) 24.7 0.0247 P1 cortex CACTGTTGAG (4) 13.6 0.0136 P1 cortex GGAAACAAAA (3) 4.5 0.0045 Hypothalamus CACTGTTGAG (4) 3.6 0.0036 Hypothalamus AAATTAATAA (5) 1.8 0.0018 E12.5 retina AAATTAATAA (5) 1.9 0.0019 E14.5 retina CAGTTTTGTT (3) 1.8 0.0018 E16.5 retina AAATTAATAA (5) 1.8 0.0018 E16.5 retina GGAAACAAAA (3) 1.8 0.0018 E18.5 retina CACTGTTGAG (4) 3.6 0.0036 E18.5 retina GGAAACAAAA (3) 3.6 0.0036 P0.5 retina CACTGTTGAG (4) 9.8 0.0098 P0.5 retina AAATTAATAA (5) 2 0.002 P2.5 retina CACTGTTGAG (4) 3.5 0.0035 P4.5 retina CACTGTTGAG (4) 2 0.002 P6.5 retina CACTGTTGAG (4) 3.3 0.0033 P6.5 retina CAGTTTTGTT (3) 1.7 0.0017 P6.5 retina TAAATGCCCA (3) 1.7 0.0017 P10.5 crx- retina CACTGTTGAG (4) 1.9 0.0019 P10.5 crx- retina TAAATGCCCA (3) 1.9 0.0019 P10.5 crx+ retina CACTGTTGAG (4) 1.9 0.0019 P10.5 crx+ retina TAAATGCCCA (3) 1.9 0.0019 ONL AAATTAATAA (5) 1.9 0.0019 ONL CAGTTTTGTT (3) 1.9 0.0019 ONL GGTCCTGCTT (3) 1.9 0.0019