Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.998	Psen1	presenilin 1	12	12 37.0 cM	19164
Gene Ontology	apoptosis | blood vessel development | endoplasmic reticulum | Golgi apparatus | heart development | integral to membrane | intracellular signaling cascade | membrane | neuronal migration | nucleus | positive regulation of protein kinase activity | protein binding
Human Homolog	PSEN1[presenilin 1 (Alzheimer disease 3)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 28 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTGGAAATAA (2) 4.9 0.0049 Cb medulloblastoma TGATGCAAAT 4.6 0.0046 P8 GC+1d culture TGATGCAAAT 3.4 0.0034 P8 GC+1d culture TTGGAAATAA (2) 3.4 0.0034 P8 GC+SHH+1d culture TTGGAAATAA (2) 3.5 0.0035 P8 GC+SHH+1d culture TGATGCAAAT 1.2 0.0012 P1 cortex TGATGCAAAT 4.5 0.0045 P1 cortex TTGGAAATAA (2) 4.5 0.0045 Hypothalamus TTGGAAATAA (2) 3.6 0.0036 E12.5 retina TTGGAAATAA (2) 3.8 0.0038 E12.5 retina TGATGCAAAT 1.9 0.0019 E14.5 retina TTGGAAATAA (2) 7.3 0.0073 E14.5 retina TGATGCAAAT 1.8 0.0018 E16.5 retina TGATGCAAAT 3.6 0.0036 E16.5 retina TTGGAAATAA (2) 3.6 0.0036 E18.5 retina TTGGAAATAA (2) 5.5 0.0055 P0.5 retina TGATGCAAAT 2 0.002 P2.5 retina TTGGAAATAA (2) 7 0.007 P2.5 retina TGATGCAAAT 1.8 0.0018 P4.5 retina TGATGCAAAT 5.9 0.0059 P4.5 retina TTGGAAATAA (2) 5.9 0.0059 P6.5 retina TTGGAAATAA (2) 5 0.005 P10.5 crx- retina TTGGAAATAA (2) 3.7 0.0037 P10.5 crx+ retina GATCCAGGGG 5.8 0.0058 P10.5 crx+ retina TGATGCAAAT 1.9 0.0019 P10.5 crx+ retina TTGGAAATAA (2) 1.9 0.0019 Adult retinal GATCCAGGGG 1.9 0.0019 ONL AGAGAAAGAA (2) 3.8 0.0038