| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GTGGTGGTGG (4) TAATGTGTAG
| 6.5 | 0.0065 |
| Cb medulloblastoma | GGCCCCTCCC (2) GTGGTGGTGG (4) TCAAGAACAA (3)
| 9.2 | 0.0092 |
| P8 GC+1d culture | GGCCCCTCCC (2)
| 2.3 | 0.0023 |
| P8 GC+SHH+1d culture | GGCCCCTCCC (2) TAATGTGTAG TCAAGAACAA (3)
| 8.2 | 0.0082 |
| 3T3 fibroblasts | CTGAGCAAGG (2) GGCCCCTCCC (2)
| 10.5 | 0.0105 |
| E15 cortex | ACCAGCCTGG GGCCCCTCCC (2)
| 29.6 | 0.0296 |
| P1 cortex | GGCCCCTCCC (2)
| 4.5 | 0.0045 |
| Hypothalamus | CTCTGCCCTC CTGAGCAAGG (2) GTGGTGGTGG (4)
| 7.2 | 0.0072 |
| E12.5 retina | GTGGTGGTGG (4)
| 1.9 | 0.0019 |
| E14.5 retina | ACCAGCCTGG CTGAGCAAGG (2) TAATGTGTAG TCAAGAACAA (3)
| 10.9 | 0.0109 |
| E16.5 retina | ACCAGCCTGG CTCTGCCCTC CTGAGCAAGG (2) GGCCCCTCCC (2) GTGGTGGTGG (4) TAATGTGTAG TCAAGAACAA (3)
| 23.5 | 0.0235 |
| E18.5 retina | GGCCCCTCCC (2) GTGGGGGGGC TCAAGAACAA (3)
| 9.1 | 0.0091 |
| P0.5 retina | ACCAGCCTGG GGCCCCTCCC (2) TCAAGAACAA (3)
| 11.8 | 0.0118 |
| P2.5 retina | GGCCCCTCCC (2) GTGGGGGGGC
| 7.1 | 0.0071 |
| P4.5 retina | GGCCCCTCCC (2)
| 2 | 0.002 |
| P6.5 retina | ACCAGCCTGG GGCCCCTCCC (2) GTGGTGGTGG (4)
| 5.1 | 0.0051 |
| P10.5 crx- retina | CTCTGCCCTC GGCCCCTCCC (2) GTGGTGGTGG (4) TCAAGAACAA (3)
| 14.9 | 0.0149 |
| P10.5 crx+ retina | GGCCCCTCCC (2) GTGGTGGTGG (4)
| 3.8 | 0.0038 |
| Adult retinal | GTGGTGGTGG (4) TAATGTGTAG
| 3.8 | 0.0038 |
| ONL | GTGGTGGTGG (4) TCAAGAACAA (3)
| 5.7 | 0.0057 |