Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.10027	Prpf4b	PRP4 pre-mRNA processing factor 4 homolog B (yeast)	13		19134
Gene Ontology	ATP binding | chromosome | kinase activity | mRNA processing | nuclear mRNA splicing, via spliceosome | nucleus | protein amino acid phosphorylation | protein kinase activity | protein serine/threonine kinase activity | protein-tyrosine kinase activity | transferase activity
Human Homolog	PRPF4B[PRP4 pre-mRNA processing factor 4 homolog B (yeast)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 62 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGCCAAGGGT GGAAGTGGGC TTTCTGGATA (2) 8.2 0.0082 Cb medulloblastoma AGCAACATTA (5) AGCCAAGGGT GGAAGTGGGC TCAGTGTTGA (2) 16.1 0.0161 P8 GC+1d culture AGCCAAGGGT GGAAGTGGGC TCAGTGTTGA (2) TTTCTGGATA (2) 14.8 0.0148 P8 GC+SHH+1d culture GGAAGTGGGC 7 0.007 3T3 fibroblasts GGAAGTGGGC 7 0.007 E15 cortex AGCCAAGGGT GGAAGTGGGC 19.7 0.0197 P1 cortex AGCAACATTA (5) TCAGTGTTGA (2) 9 0.009 Hypothalamus GGAAGTGGGC TCAGTGTTGA (2) TGTTAAAATT 9 0.009 E12.5 retina GGAAGTGGGC 13.1 0.0131 E14.5 retina AGCCAAGGGT GGAAGTGGGC 9.1 0.0091 E16.5 retina AGCCAAGGGT ATTACGCCAA GGAAGTGGGC TTGTCTTTCA 16.2 0.0162 E18.5 retina GGAAGTGGGC 7.3 0.0073 P0.5 retina AGCAACATTA (5) AGCCAAGGGT ATTACGCCAA GGAAGTGGGC TTTCTGGATA (2) 21.7 0.0217 P2.5 retina AGCCAAGGGT GGAAGTGGGC TCAGTGTTGA (2) TTGTCTTTCA TTTCTGGATA (2) 17.6 0.0176 P4.5 retina AGCCAAGGGT GGAAGTGGGC TAATTCCTTT TCAGTGTTGA (2) 25.7 0.0257 P6.5 retina AGCAACATTA (5) AGCCAAGGGT GGAAGTGGGC 18.4 0.0184 P10.5 crx- retina AGCCAAGGGT GGAAGTGGGC TAATTCCTTT TGTTAAAATT TTTCTGGATA (2) 11.3 0.0113 P10.5 crx+ retina AGCCAAGGGT GGAAGTGGGC TCAGTGTTGA (2) 17.2 0.0172 Adult retinal AGCCAAGGGT ATTACGCCAA GGAAGTGGGC TCAGTGTTGA (2) 16.7 0.0167 ONL AGCCAAGGGT TAATTCCTTT TCAGTGTTGA (2) TGTTAAAATT TTGTCTTTCA 15.2 0.0152