| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAAAAAAAA (2) CAATATATAA (4) GAGTAGTGTG GGAAAAAAAA (2)
| 215.3 | 0.2153 |
| Cb medulloblastoma | AAAAAAAAAA (2) GGAAAAAAAA (2)
| 839.4 | 0.8394 |
| P8 GC+1d culture | AAAAAAAAAA (2) GAGTAGTGTG GGAAAAAAAA (2) TAAAAACTCA (2) TGGTGTAGGG
| 216.8 | 0.2168 |
| P8 GC+SHH+1d culture | AAAAAAAAAA (2) GAGTAGTGTG GGAAAAAAAA (2) GTTTTCTTTT
| 289.2 | 0.2892 |
| 3T3 fibroblasts | AAAAAAAAAA (2)
| 28 | 0.028 |
| E15 cortex | AAAAAAAAAA (2) GGAAAAAAAA (2)
| 222.7 | 0.2227 |
| P1 cortex | AAAAAAAAAA (2) GGAAAAAAAA (2) GTTTTCTTTT
| 254.4 | 0.2544 |
| Hypothalamus | AAAAAAAAAA (2) CAATATATAA (4) GGAAAAAAAA (2) GTTTTCTTTT TGGTGTAGGG
| 148.5 | 0.1485 |
| E12.5 retina | AAAAAAAAAA (2) GGAAAAAAAA (2)
| 140.8 | 0.1408 |
| E14.5 retina | AAAAAAAAAA (2) GGAAAAAAAA (2) GTTTTCTTTT
| 111.1 | 0.1111 |
| E16.5 retina | AAAAAAAAAA (2) GAGTAGTGTG GGAAAAAAAA (2) GTTTTCTTTT TAAAAACTCA (2)
| 54.3 | 0.0543 |
| E18.5 retina | AAAAAAAAAA (2) GGAAAAAAAA (2) GTTTTCTTTT
| 394.7 | 0.3947 |
| P0.5 retina | AAAAAAAAAA (2) GAGTAGTGTG GGAAAAAAAA (2)
| 133.5 | 0.1335 |
| P2.5 retina | AAAAAAAAAA (2) GGAAAAAAAA (2) GTTTTCTTTT
| 343.1 | 0.3431 |
| P4.5 retina | AAAAAAAAAA (2) CAATATATAA (4) GAGTAGTGTG GGAAAAAAAA (2) GTTTTCTTTT TGGTGTAGGG
| 305.2 | 0.3052 |
| P6.5 retina | AAAAAAAAAA (2) GAGTAGTGTG GGAAAAAAAA (2)
| 281.8 | 0.2818 |
| P10.5 crx- retina | AAAAAAAAAA (2) GGAAAAAAAA (2) GTTTTCTTTT TAAAAACTCA (2)
| 53.9 | 0.0539 |
| P10.5 crx+ retina | AAAAAAAAAA (2) GGAAAAAAAA (2)
| 111.5 | 0.1115 |
| Adult retinal | AAAAAAAAAA (2) GGAAAAAAAA (2) GTTTTCTTTT
| 66.7 | 0.0667 |
| ONL | AAAAAAAAAA (2) GGAAAAAAAA (2)
| 120.6 | 0.1206 |