| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CTTAGAGTCC GGCTCCTTGG (2)
| 14.7 | 0.0147 |
| Cb medulloblastoma | GGCTCCTTGG (2)
| 4.6 | 0.0046 |
| P8 GC+1d culture | CTTAGAGTCC GAAACTGGGA GGCTCCTTGG (2) GTCCTGGGGG (3)
| 11.3 | 0.0113 |
| P8 GC+SHH+1d culture | CTTAGAGTCC GGCTCCTTGG (2)
| 7 | 0.007 |
| 3T3 fibroblasts | GTCCTGGGGG (3)
| 7 | 0.007 |
| E15 cortex | GGCTCCTTGG (2) GTCCTGGGGG (3)
| 24.7 | 0.0247 |
| P1 cortex | CTTAGAGTCC
| 4.5 | 0.0045 |
| E12.5 retina | CAGTATGAGG CTTAGAGTCC GGCTCCTTGG (2)
| 7.6 | 0.0076 |
| E14.5 retina | CTTAGAGTCC GAAACTGGGA GGCTCCTTGG (2)
| 5.4 | 0.0054 |
| E18.5 retina | CTTAGAGTCC GGCTCCTTGG (2) GTCCTGGGGG (3)
| 9.1 | 0.0091 |
| P0.5 retina | CTTAGAGTCC GGCTCCTTGG (2) GTCCTGGGGG (3)
| 9.8 | 0.0098 |
| P2.5 retina | CTTAGAGTCC GGCTCCTTGG (2) GTCCTGGGGG (3)
| 10.6 | 0.0106 |
| P4.5 retina | CTTAGAGTCC GGCTCCTTGG (2)
| 8 | 0.008 |
| P6.5 retina | CAGTATGAGG CTTAGAGTCC GGCTCCTTGG (2) GTCCTGGGGG (3)
| 11.7 | 0.0117 |
| P10.5 crx- retina | CAGTATGAGG CTTAGAGTCC GGCTCCTTGG (2)
| 18.6 | 0.0186 |
| P10.5 crx+ retina | CTTAGAGTCC GGCTCCTTGG (2) GTCCTGGGGG (3)
| 9.6 | 0.0096 |
| Adult retinal | CGCAAGGCGG (2) CTTAGAGTCC GGCTCCTTGG (2)
| 7.5 | 0.0075 |
| ONL | CGCAAGGCGG (2) GAAACTGGGA GGCTCCTTGG (2)
| 9.5 | 0.0095 |