| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CACCCACCAA (3) GCTTTGAATG TGGTTGCTGG TTTAAACTCT (2)
| 164.7 | 0.1647 |
| Cb medulloblastoma | GCTTTGAATG TGGTTGCTGG
| 148 | 0.148 |
| P8 GC+1d culture | CACCCACCAA (3) CTAGATTGCG GCTTTGAATG TGGTTGCTGG TTTAAACTCT (2)
| 148.3 | 0.1483 |
| P8 GC+SHH+1d culture | CACCCACCAA (3) GAAGCCCAAA GCTTTGAATG TGGTTGCTGG TTTAAACTCT (2)
| 179.2 | 0.1792 |
| 3T3 fibroblasts | GCTTTGAATG TGGTTGCTGG
| 224.3 | 0.2243 |
| E15 cortex | GAAGCCCAAA GCTTTGAATG TGGTTGCTGG
| 326.5 | 0.3265 |
| P1 cortex | GCTTTGAATG TGGTTGCTGG TTTAAACTCT (2)
| 118.2 | 0.1182 |
| Hypothalamus | CACCCACCAA (3) GCTTTGAATG TGGTTGCTGG
| 394.9 | 0.3949 |
| E12.5 retina | CACCCACCAA (3) GCTTTGAATG TGGTTGCTGG TTTAAACTCT (2)
| 219.7 | 0.2197 |
| E14.5 retina | AACTTTTACC CACCCACCAA (3) GAAGCCCAAA GCTTTGAATG TGGTTGCTGG TTTAAACTCT (2)
| 1011.1 | 1.0111 |
| E16.5 retina | CACCCACCAA (3) GCTTTGAATG TGGTTGCTGG TTTAAACTCT (2)
| 824 | 0.824 |
| E18.5 retina | CTAGATTGCG GCTTTGAATG TGGTTGCTGG TTTAAACTCT (2)
| 305.5 | 0.3055 |
| P0.5 retina | CACCCACCAA (3) GCTTTGAATG TGGTTGCTGG TTTAAACTCT (2)
| 243.4 | 0.2434 |
| P2.5 retina | AACTTTTACC CACCCACCAA (3) CTAGATTGCG GCTTTGAATG TGGTTGCTGG TTTAAACTCT (2)
| 241.2 | 0.2412 |
| P4.5 retina | CACCCACCAA (3) CCAGTGTTAA GCTTTGAATG TGGTTGCTGG TTTAAACTCT (2)
| 214 | 0.214 |
| P6.5 retina | CACCCACCAA (3) GCTTTGAATG TGGTTGCTGG TTTAAACTCT (2)
| 220.1 | 0.2201 |
| P10.5 crx- retina | GCTTTGAATG TGGTTGCTGG TTTAAACTCT (2)
| 366 | 0.366 |
| P10.5 crx+ retina | AACTTTTACC CACCCACCAA (3) CCAGTGTTAA GCTTTGAATG TGGTTGCTGG TTTAAACTCT (2)
| 163.3 | 0.1633 |
| Adult retinal | GCTTTGAATG TGATGTAAAC TGGTTGCTGG TTTAAACTCT (2)
| 237.1 | 0.2371 |
| ONL | AACTTTTACC GCTTTGAATG TGGTTGCTGG
| 421.4 | 0.4214 |