Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.102705
2900054C01Rik
RIKEN cDNA 2900054C01 gene
X
73049
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 40 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCAAAAAAAA (
3
)
22.8
0.0228
Cb medulloblastoma
CCAAAAAAAA (
3
)
TCCCCTCCTG
92.5
0.0925
P8 GC+1d culture
CCAAAAAAAA (
3
)
TATACCTGTA
TGGGAAGATC
(
2
)
41
0.041
P8 GC+SHH+1d culture
CCAAAAAAAA (
3
)
TATACCTGTA
TCTTTAATAA
43.3
0.0433
3T3 fibroblasts
TCCCCTCCTG
3.5
0.0035
E15 cortex
CCAAAAAAAA (
3
)
9.9
0.0099
P1 cortex
CCAAAAAAAA (
3
)
TATACCTGTA
50
0.05
Hypothalamus
CCAAAAAAAA (
3
)
TATACCTGTA
TCTTTAATAA
TGGGAAGATC
(
2
)
45.2
0.0452
E12.5 retina
CCAAAAAAAA (
3
)
TCCCCTCCTG
18.8
0.0188
E14.5 retina
CCAAAAAAAA (
3
)
TCCCCTCCTG
21.8
0.0218
E16.5 retina
CCAAAAAAAA (
3
)
16.3
0.0163
E18.5 retina
CCAAAAAAAA (
3
)
TCCCCTCCTG
40
0.04
P0.5 retina
CCAAAAAAAA (
3
)
29.4
0.0294
P2.5 retina
CCAAAAAAAA (
3
)
TCCCCTCCTG
51
0.051
P4.5 retina
CCAAAAAAAA (
3
)
TCCCCTCCTG
TCTTTAATAA
47.5
0.0475
P6.5 retina
CCAAAAAAAA (
3
)
TCCCCTCCTG
45
0.045
P10.5 crx- retina
CCAAAAAAAA (
3
)
TCCCCTCCTG
16.8
0.0168
P10.5 crx+ retina
CCAAAAAAAA (
3
)
TCCCCTCCTG
42.2
0.0422
Adult retinal
CCAAAAAAAA (
3
)
TCCCCTCCTG
37.1
0.0371
ONL
CCAAAAAAAA (
3
)
TCCCCTCCTG
11.5
0.0115
