Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.10288	Atp9a	ATPase, class II, type 9A	2		11981
Gene Ontology	ATP binding | ATPase activity | ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | cation transport | hydrolase activity | integral to membrane | magnesium ion binding | membrane
Human Homolog	ATP9A[ATPase, Class II, type 9A]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 93 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACAAGAGGTT AGGTGCCCAG (2) GTGGATGTCA (3) TGATAAAAGT (4) TGGGAGGGAT TTGTTCTGAC 45.7 0.0457 Cb medulloblastoma AGGTGCCCAG (2) GTGGATGTCA (3) TGATAAAAGT (4) TTGTTCTGAC 43.9 0.0439 P8 GC+1d culture ACAAGAGGTT AGCCACCTCA (3) GCTGGCTGCC GCTTGGCATT (3) GTGGATGTCA (3) TGATAAAAGT (4) TTGTTCTGAC 52.3 0.0523 P8 GC+SHH+1d culture AGGTGCCCAG (2) ATGAGACCTG GCTGGCTGCC GTGGATGTCA (3) TGATAAAAGT (4) TTGCAGCAGA (4) TTGTTCTGAC 56.2 0.0562 3T3 fibroblasts AGCCACCTCA (3) 7 0.007 E15 cortex GTGGATGTCA (3) TTGTTCTGAC 9.8 0.0098 P1 cortex GCTGGCTGCC GTGGATGTCA (3) TGATAAAAGT (4) 31.8 0.0318 Hypothalamus ACAAGAGGTT AGGCTTCGCT GTGGATGTCA (3) TGATAAAAGT (4) TTGCAGCAGA (4) TTGTTCTGAC 70.6 0.0706 E12.5 retina AGCCACCTCA (3) GCTGGCTGCC GTGGATGTCA (3) TTGTTCTGAC 30.1 0.0301 E14.5 retina ACAAGAGGTT AGGTGCCCAG (2) ATGAGACCTG TGATAAAAGT (4) TTGTTCTGAC 38.2 0.0382 E16.5 retina ACAAGAGGTT AGCCACCTCA (3) AGGTGCCCAG (2) GAACTGGCCT GCTGGCTGCC TGATAAAAGT (4) TGGAAGAGTG TGGGAGGGAT TTGTTCTGAC 59.7 0.0597 E18.5 retina ACAAGAGGTT AGGTGCCCAG (2) GCTGGCTGCC GTGGATGTCA (3) TGATAAAAGT (4) TGGAAGAGTG TTGTTCTGAC 59.9 0.0599 P0.5 retina AGCCACCTCA (3) AGGTGCCCAG (2) GAACTGGCCT TTGTTCTGAC 19.7 0.0197 P2.5 retina AGGTGCCCAG (2) TGATAAAAGT (4) TTGTTCTGAC 65.1 0.0651 P4.5 retina GTGGATGTCA (3) TGATAAAAGT (4) TGGAAGAGTG TTGTTCTGAC 73.4 0.0734 P6.5 retina ACAAGAGGTT AGCCACCTCA (3) AGGCTTCGCT GAACTGGCCT GCTTGGCATT (3) TGATAAAAGT (4) TGGGAGGGAT TTGCAGCAGA (4) TTGTTCTGAC 65.1 0.0651 P10.5 crx- retina AGCCACCTCA (3) TGATAAAAGT (4) TTGTTCTGAC 39 0.039 P10.5 crx+ retina ATGAGACCTG GCTTGGCATT (3) TGATAAAAGT (4) TTGTTCTGAC 67.2 0.0672 Adult retinal GCTGGCTGCC GCTTGGCATT (3) TGATAAAAGT (4) TTGTTCTGAC 50.1 0.0501 ONL TTGTTCTGAC 13.4 0.0134