| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAAAAAAAA (2) AATGCACACA (5) GAAACAAGGG GGAAAAAAAG (2) TGTATGACTG TGTGTTCCTG (2)
| 213.6 | 0.2136 |
| Cb medulloblastoma | AAAAAAAAAA (2) GAGACTGATC GATCTAGCTC (2) TGTATGACTG TGTGTTGCTA
| 816.2 | 0.8162 |
| P8 GC+1d culture | AAAAAAAAAA (2) AATGCACACA (5) GAAACAAGGG GAGACTGATC GATCTAGCTC (2) TGTATGACTG
| 212.2 | 0.2122 |
| P8 GC+SHH+1d culture | AAAAAAAAAA (2) AATGCACACA (5) GAGACTGATC TGTGTTGCTA
| 282.3 | 0.2823 |
| 3T3 fibroblasts | AAAAAAAAAA (2) GTGGGAGGCC
| 31.5 | 0.0315 |
| E15 cortex | AAAAAAAAAA (2) GTGGTGGTGT
| 217.7 | 0.2177 |
| P1 cortex | AAAAAAAAAA (2)
| 245.4 | 0.2454 |
| Hypothalamus | AAAAAAAAAA (2) GTGGTGGTGT TGTATGACTG TGTGTTGCTA
| 137.7 | 0.1377 |
| E12.5 retina | AAAAAAAAAA (2) GAAACAAGGG
| 140.8 | 0.1408 |
| E14.5 retina | AAAAAAAAAA (2) TGTGTTCCTG (2)
| 96.5 | 0.0965 |
| E16.5 retina | AAAAAAAAAA (2) GAGACTGATC GTGGGAGGCC
| 48.9 | 0.0489 |
| E18.5 retina | AAAAAAAAAA (2) AATGCACACA (5) GTGGTGGTGT TGTGTTCCTG (2)
| 380.1 | 0.3801 |
| P0.5 retina | AAAAAAAAAA (2) AATGCACACA (5) GAGACTGATC
| 123.7 | 0.1237 |
| P2.5 retina | AAAAAAAAAA (2) GAGACTGATC GGAAAAAAAG (2) GTGGTGGTGT
| 338 | 0.338 |
| P4.5 retina | AAAAAAAAAA (2)
| 283.3 | 0.2833 |
| P6.5 retina | AAAAAAAAAA (2) AATGCACACA (5) GATCTAGCTC (2) GTGGGAGGCC TGTATGACTG
| 273.6 | 0.2736 |
| P10.5 crx- retina | AAAAAAAAAA (2) GAAACAAGGG GAGACTGATC GAGGCCCCAA (2) GTGGTGGTGT TGTGTTGCTA
| 57.8 | 0.0578 |
| P10.5 crx+ retina | AAAAAAAAAA (2) AATGCACACA (5) GAGACTGATC GAGGCCCCAA (2)
| 101.8 | 0.1018 |
| Adult retinal | AAAAAAAAAA (2) TGTATGACTG TGTGTTCCTG (2)
| 61.2 | 0.0612 |
| ONL | AAAAAAAAAA (2) AATGCACACA (5) TGTATGACTG
| 113 | 0.113 |