Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.103568	Slc38a1	solute carrier family 38, member 1	15		105727
Gene Ontology	amino acid transport | amino acid-polyamine transporter activity | axon | integral to membrane | L-glutamine transport | L-glutamine transporter activity | membrane | membrane fraction | plasma membrane
Human Homolog	SLC38A1[solute carrier family 38, member 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 80 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAGCACACCA TGGAGCGATT 13 0.013 Cb medulloblastoma ATTGGCAGAA TAGCACACCA TCACAAGAAA TCTTGGTGAC (2) TTCTCAGATA (3) 32.3 0.0323 P8 GC+1d culture AAGGATATCT (2) TAGCACACCA TCTGCCTTTT (2) TCTTGGTGAC (2) TGGAGCGATT TTCTCCTTCA (4) 15.8 0.0158 P8 GC+SHH+1d culture AAGGATATCT (2) CTGCTGCCTT (3) GTGTCCTCTG TAGCACACCA TCACAAGAAA TCTTGGTGAC (2) TGGAGCGATT TTCTCCTTCA (4) 26 0.026 P1 cortex AAGGATATCT (2) CTGCTGCCTT (3) 18.1 0.0181 Hypothalamus AAGGATATCT (2) ATTGGCAGAA CTGCTGCCTT (3) GTGTCCTCTG TAGCACACCA TTCTCCTTCA (4) 14.4 0.0144 E12.5 retina TCACAAGAAA TCTGCCTTTT (2) TGGAGCGATT 5.7 0.0057 E14.5 retina AAGGATATCT (2) CTGCTGCCTT (3) TCTGCCTTTT (2) TCTTGGTGAC (2) 9 0.009 E16.5 retina CTGCTGCCTT (3) TACTGAGTCA TAGCACACCA TCACAAGAAA TCTTGGTGAC (2) TGGAGCGATT 12.6 0.0126 E18.5 retina TAGCACACCA TGGAGCGATT TTCTCAGATA (3) 5.4 0.0054 P0.5 retina TACTGAGTCA TCTGCCTTTT (2) TCTTGGTGAC (2) TGGAGCGATT TTCTCCTTCA (4) 17.7 0.0177 P2.5 retina AAGGATATCT (2) TAGCACACCA TCTTGGTGAC (2) 8.8 0.0088 P4.5 retina TACTGAGTCA TAGCACACCA TCTTGGTGAC (2) TGACCAGGCA TGGAGCGATT TTCTCCTTCA (4) 29.8 0.0298 P6.5 retina GTGTCCTCTG TAGCACACCA TCACAAGAAA TCTTGGTGAC (2) TTCTCCTTCA (4) 20 0.02 P10.5 crx- retina CTGCTGCCTT (3) TAGCACACCA TCTTGGTGAC (2) 11.2 0.0112 P10.5 crx+ retina AAGGATATCT (2) TAGCACACCA TCTTGGTGAC (2) TTCTCCTTCA (4) 19.1 0.0191 Adult retinal GTGTCCTCTG TACTGAGTCA TAGCACACCA TCTTGGTGAC (2) TTCTCAGATA (3) TTCTCCTTCA (4) 42.8 0.0428 ONL GTGTCCTCTG TCTTGGTGAC (2) TGACCAGGCA 26.8 0.0268