| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AGACTCAGGC (2) CAGAACACAC GTATTTTCAA (2) TGCTTTGAAA (2) TTCTGGCATC
| 16.3 | 0.0163 |
| Cb medulloblastoma | TGAACACACA (2) TGCTTTGAAA (2) TTCTGGCATC
| 27.7 | 0.0277 |
| P8 GC+1d culture | AGACTCAGGC (2) CAGAACACAC GCAGTGCGGG GTATTTTCAA (2) TGCTTTGAAA (2) TTCTGGCATC
| 18.2 | 0.0182 |
| P8 GC+SHH+1d culture | AGACTCAGGC (2) CAGAACACAC GCAGTGCGGG GTATTTTCAA (2) TGAACACACA (2) TGCTTTGAAA (2) TTCTGGCATC
| 27 | 0.027 |
| 3T3 fibroblasts | CAGAACACAC TGCTTTGAAA (2)
| 7 | 0.007 |
| E15 cortex | TGCTTTGAAA (2) TTCTGGCATC
| 9.8 | 0.0098 |
| P1 cortex | TGCTTTGAAA (2)
| 9.1 | 0.0091 |
| Hypothalamus | GCAGTGCGGG GTATTTTCAA (2) TGCTTTGAAA (2) TTCTGGCATC
| 7.2 | 0.0072 |
| E12.5 retina | TTCTGGCATC
| 1.9 | 0.0019 |
| E14.5 retina | GCAGTGCGGG TGCTTTGAAA (2) TTCTGGCATC
| 7.2 | 0.0072 |
| E16.5 retina | CAGAACACAC GCAGTGCGGG TGCTTTGAAA (2) TTCTGGCATC
| 25.3 | 0.0253 |
| E18.5 retina | AGACTCAGGC (2) CAGAACACAC TGCTTTGAAA (2) TTCTGGCATC
| 14.5 | 0.0145 |
| P0.5 retina | CAGAACACAC TGAACACACA (2)
| 4 | 0.004 |
| P2.5 retina | AGACTCAGGC (2) TGCTTTGAAA (2)
| 12.4 | 0.0124 |
| P4.5 retina | CAGAACACAC GCAGTGCGGG GTATTTTCAA (2) TGAACACACA (2) TGCTTTGAAA (2) TTCTGGCATC
| 17.9 | 0.0179 |
| P6.5 retina | AGACTCAGGC (2) GTATTTTCAA (2) TGCTTTGAAA (2) TTCTGGCATC
| 6.8 | 0.0068 |
| P10.5 crx- retina | CAGAACACAC GCAGTGCGGG TGCTTTGAAA (2) TTCTGGCATC
| 18.6 | 0.0186 |
| P10.5 crx+ retina | AGACTCAGGC (2) GTATTTTCAA (2) TGCTTTGAAA (2) TTCTGGCATC
| 21.1 | 0.0211 |
| Adult retinal | GCAGTGCGGG TGAACACACA (2)
| 5.6 | 0.0056 |
| ONL | TGAACACACA (2)
| 1.9 | 0.0019 |