| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAACTTAATT (3) CATACTTGAC (2) GGGGGCCGGT
| 6.5 | 0.0065 |
| Cb medulloblastoma | AAACTTAATT (3) GTTCTGCAGA (3)
| 9.2 | 0.0092 |
| P8 GC+1d culture | AGGGTGTCCT (2) GACAGTGGAG (4) GATACTTGAA (2) GGGGGCCGGT GTGAGCACTG TGGAAATGTT (5)
| 7.8 | 0.0078 |
| P8 GC+SHH+1d culture | AAACTTAATT (3) CATACTTGAC (2) GACAGTGGAG (4) GATACTTGAA (2) GGGGGCCGGT TGGAAATGTT (5)
| 15.3 | 0.0153 |
| 3T3 fibroblasts | GACAGTGGAG (4)
| 3.5 | 0.0035 |
| E15 cortex | GACAGTGGAG (4) GATACTTGAA (2)
| 14.8 | 0.0148 |
| P1 cortex | GATACTTGAA (2) TGGAAATGTT (5)
| 9 | 0.009 |
| Hypothalamus | AAACTTAATT (3) GTGAGCACTG GTTCTGCAGA (3)
| 9 | 0.009 |
| E12.5 retina | AAACTTAATT (3) AGGGTGTCCT (2)
| 7.5 | 0.0075 |
| E14.5 retina | AAACTTAATT (3) GACAGTGGAG (4)
| 7.3 | 0.0073 |
| E16.5 retina | AAACTTAATT (3) GACAGTGGAG (4) GTGAGCACTG GTTCTGCAGA (3)
| 16.3 | 0.0163 |
| E18.5 retina | AAACTTAATT (3) AGGGTGTCCT (2) GACAGTGGAG (4)
| 7.2 | 0.0072 |
| P0.5 retina | GACAGTGGAG (4) GTGAGCACTG TGGAAATGTT (5)
| 7.9 | 0.0079 |
| P2.5 retina | AGGGTGTCCT (2) TGGAAATGTT (5)
| 5.3 | 0.0053 |
| P4.5 retina | AAACTTAATT (3) AGGGTGTCCT (2)
| 4 | 0.004 |
| P6.5 retina | AAACTTAATT (3) CATACTTGAC (2) GACAGTGGAG (4)
| 6.7 | 0.0067 |
| P10.5 crx- retina | AAACTTAATT (3) GACAGTGGAG (4) GTTCTGCAGA (3) TGGAAATGTT (5)
| 13.1 | 0.0131 |
| P10.5 crx+ retina | TGGAAATGTT (5)
| 1.9 | 0.0019 |
| Adult retinal | GACAGTGGAG (4)
| 5.6 | 0.0056 |
| ONL | AAACTTAATT (3) GGGGGCCGGT GTGAGCACTG GTTCTGCAGA (3)
| 7.6 | 0.0076 |