Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.104540	Napa	N-ethylmaleimide sensitive fusion protein attachment protein alpha	7	7 15.2 cM	108124
Gene Ontology	apical protein localization | brain development | endoplasmic reticulum | Golgi apparatus | intracellular protein transport | intracellular transporter activity | neuron differentiation | protein transport | syntaxin binding | transport
Human Homolog	NAPA[N-ethylmaleimide-sensitive factor attachment protein, alpha]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 111 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (2) AAGGAACAGA (2) AGGAACAGGA (2) CATCCAGGTC CCAAAAAAAA (3) 231.5 0.2315 Cb medulloblastoma AAAAAAAAAA (2) AGGAACAGGA (2) CATCCAGGTC CCAAAAAAAA (3) GGTGCTGAAT (2) 899.5 0.8995 P8 GC+1d culture AAAAAAAAAA (2) AGGAACAGGA (2) CATCCAGGTC CCAAAAAAAA (3) GGTGCTGAAT (2) TCTCTGGTCA 264.7 0.2647 P8 GC+SHH+1d culture AAAAAAAAAA (2) AGGAACAGGA (2) CATCCAGGTC CCAAAAAAAA (3) GGTGCTGAAT (2) 329.1 0.3291 3T3 fibroblasts AAAAAAAAAA (2) AGGAACAGGA (2) 45.5 0.0455 E15 cortex AAAAAAAAAA (2) AGCTCCAGGG (3) AGGAACAGGA (2) CATCCAGGTC CCAAAAAAAA (3) GGTGCTGAAT (2) 257.2 0.2572 P1 cortex AAAAAAAAAA (2) AGGAACAGGA (2) CCAAAAAAAA (3) GGTGCTGAAT (2) 299.9 0.2999 Hypothalamus AAAAAAAAAA (2) AGGAACAGAA (2) AGGAACAGGA (2) CATCCAGGTC CCAAAAAAAA (3) GGGGTGGGGC GGTGCTGAAT (2) 175.6 0.1756 E12.5 retina AAAAAAAAAA (2) AGGAACAGAA (2) AGGAACAGGA (2) CCAAAAAAAA (3) GGTGCTGAAT (2) 170.8 0.1708 E14.5 retina AAAAAAAAAA (2) AGCTCCAGGG (3) AGGAACAGGA (2) CATCCAGGTC CCAAAAAAAA (3) GGTGCTGAAT (2) 125.5 0.1255 E16.5 retina AAAAAAAAAA (2) AGCTCCAGGG (3) AGGAACAGGA (2) CATCCAGGTC CCAAAAAAAA (3) GGTGCTGAAT (2) 76 0.076 E18.5 retina AAAAAAAAAA (2) AGGAACAGGA (2) CATCCAGGTC CCAAAAAAAA (3) GATCAGGTAA GGTGCTGAAT (2) TCTCTGGTCA 429.2 0.4292 P0.5 retina AAAAAAAAAA (2) AGGAACAGGA (2) CCAAAAAAAA (3) GGTGCTGAAT (2) 155.1 0.1551 P2.5 retina AAAAAAAAAA (2) AGGAACAGGA (2) CATCCAGGTC CCAAAAAAAA (3) GGGGTGGGGC GGTGCTGAAT (2) 388.9 0.3889 P4.5 retina AAAAAAAAAA (2) AAGGAACAGA (2) AGGAACAGGA (2) CATCCAGGTC CCAAAAAAAA (3) GGTGCTGAAT (2) 336.8 0.3368 P6.5 retina AAAAAAAAAA (2) AGCTCCAGGG (3) AGGAACAGGA (2) CATCCAGGTC CCAAAAAAAA (3) GATCAGGTAA GGTGCTGAAT (2) TCTCTGGTCA 330.3 0.3303 P10.5 crx- retina AAAAAAAAAA (2) AAGGAACAGA (2) AGCTCCAGGG (3) AGGAACAGGA (2) CATCCAGGTC CCAAAAAAAA (3) GGTGCTGAAT (2) 85.5 0.0855 P10.5 crx+ retina AAAAAAAAAA (2) AGGAACAGGA (2) CATCCAGGTC CCAAAAAAAA (3) GGGGTGGGGC GGTGCTGAAT (2) 151.7 0.1517 Adult retinal AAAAAAAAAA (2) AGGAACAGGA (2) CATCCAGGTC CCAAAAAAAA (3) GATCAGGTAA GGTGCTGAAT (2) 102 0.102 ONL AAAAAAAAAA (2) CATCCAGGTC CCAAAAAAAA (3) GGTGCTGAAT (2) 114.9 0.1149