Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.104789	8430408H12Rik	RIKEN cDNA 8430408H12 gene	9		67561
Human Homolog	KIAA1449[WD repeat endosomal protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 72 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGCTGAAAA (3) CTGAAGTTGC (2) GTTGTAATTT (2) TTTTGTTTTT (2) 9.7 0.0097 Cb medulloblastoma TCACTGGCAG (2) TCCAGCACAC (3) TTTTGTTTTT (2) 6.9 0.0069 P8 GC+1d culture AATCCCAAAC ATTGTACAAC GTTGTAATTT (2) TCCAGCACAC (3) TTTGTTTTTC (2) 11.4 0.0114 P8 GC+SHH+1d culture AATCCCAAAC ATTGTACAAC CTGAAGTTGC (2) GTTGTAATTT (2) TCACTGGCAG (2) TTGATTTCTT TTTGTTTTTC (2) TTTTGTTTTT (2) 23.4 0.0234 3T3 fibroblasts CTGAAGTTGC (2) 3.5 0.0035 E15 cortex GGCCTGCTGC 4.9 0.0049 P1 cortex CTGAAGTTGC (2) TTGATTTCTT TTTTGTTTTT (2) 18.1 0.0181 Hypothalamus TTGATTTCTT TTTTGTTTTT (2) 5.4 0.0054 E12.5 retina ATTGTACAAC TCCAGCACAC (3) TTGATTTCTT 9.4 0.0094 E14.5 retina AAGCTGAAAA (3) AATCCCAAAC ATTGTACAAC TCCAGCACAC (3) TTTTGTTTTT (2) 10.8 0.0108 E16.5 retina CTGAAGTTGC (2) TCACTGGCAG (2) TCCAGCACAC (3) TTTTGTTTTT (2) 12.6 0.0126 E18.5 retina TTGATTTCTT 1.8 0.0018 P0.5 retina CTGAAGTTGC (2) GTTGTAATTT (2) TCACTGGCAG (2) TCCAGCACAC (3) 13.9 0.0139 P2.5 retina AATCCCAAAC CTGAAGTTGC (2) TCCAGCACAC (3) 5.4 0.0054 P4.5 retina AATCCCAAAC ATTGTACAAC GTTGTAATTT (2) TCCAGCACAC (3) TTTGTTTTTC (2) TTTTGTTTTT (2) 14 0.014 P6.5 retina CTGAAGTTGC (2) 1.7 0.0017 P10.5 crx- retina AATCCCAAAC ATTGTACAAC CTGAAGTTGC (2) TTGATTTCTT TTTGTTTTTC (2) 18.7 0.0187 P10.5 crx+ retina AAGCTGAAAA (3) AATCCCAAAC ATTGTACAAC GGCCTGCTGC TCACTGGCAG (2) TCCAGCACAC (3) TTGATTTCTT TTTTGTTTTT (2) 26.8 0.0268 Adult retinal CTGAAGTTGC (2) TCACTGGCAG (2) 5.6 0.0056 ONL AAGCTGAAAA (3) GGCCTGCTGC GTTGTAATTT (2) 5.7 0.0057