| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | ATGTGCAGAC CCTTTAATCC (3) GGGGGAGTCA
| 60.3 | 0.0603 |
| Cb medulloblastoma | ATGTGCAGAC CCTTTAATCC (3) GGGGGAGTCA TTTTTTAAAA (3)
| 50.8 | 0.0508 |
| P8 GC+1d culture | ATGTGCAGAC CCTTTAATCC (3)
| 34.3 | 0.0343 |
| P8 GC+SHH+1d culture | ATGTGCAGAC CCTTTAATCC (3) GGGGGAGTCA TTTTTTAAAA (3)
| 44.6 | 0.0446 |
| 3T3 fibroblasts | CCTTTAATCC (3) GGGGGAGTCA
| 77.1 | 0.0771 |
| E15 cortex | CCTTTAATCC (3)
| 54.4 | 0.0544 |
| P1 cortex | CCTTTAATCC (3)
| 154.5 | 0.1545 |
| Hypothalamus | ATGTGCAGAC CCTTTAATCC (3)
| 25.3 | 0.0253 |
| E12.5 retina | CCTTTAATCC (3) GGGGGAGTCA GTGCGCCTGG (2)
| 80.8 | 0.0808 |
| E14.5 retina | ATGTGCAGAC CCTTTAATCC (3) GGGGGAGTCA
| 125.7 | 0.1257 |
| E16.5 retina | ATGTGCAGAC CCTTTAATCC (3) GGGGGAGTCA
| 74.2 | 0.0742 |
| E18.5 retina | CCTTTAATCC (3) GGGGGAGTCA TTTTTTAAAA (3)
| 30.9 | 0.0309 |
| P0.5 retina | CCTTTAATCC (3)
| 72.6 | 0.0726 |
| P2.5 retina | ATGTGCAGAC CCTTTAATCC (3) TTTTTTAAAA (3)
| 74 | 0.074 |
| P4.5 retina | ATGTGCAGAC CCTTTAATCC (3) GGGGGAGTCA
| 49.6 | 0.0496 |
| P6.5 retina | ATGTGCAGAC CCTTTAATCC (3) GGGGGAGTCA
| 78.3 | 0.0783 |
| P10.5 crx- retina | ATGTGCAGAC CCTTTAATCC (3) GGGGGAGTCA
| 70.7 | 0.0707 |
| P10.5 crx+ retina | CCTTTAATCC (3) GTGCGCCTGG (2)
| 42.2 | 0.0422 |
| Adult retinal | ATGTGCAGAC CCTTTAATCC (3) GGGGGAGTCA
| 137.1 | 0.1371 |
| ONL | CCTTTAATCC (3)
| 84.3 | 0.0843 |