Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.10504	Pdpk1	3-phosphoinositide dependent protein kinase-1	17		18607
Gene Ontology	3-phosphoinositide-dependent protein kinase activity | ATP binding | cytoplasm | cytoplasmic vesicle | hyperosmotic response | kinase activity | membrane | protein amino acid phosphorylation | protein kinase activity | protein serine/threonine kinase activity | protein-tyrosine kinase activity | signal transduction | transferase activity
Human Homolog	PDPK1[3-phosphoinositide dependent protein kinase-1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 55 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAGGAGCAGA (3) GGGAGGGAAA TAGAGTGTAA TCAGAGGTGT (5) 13 0.013 Cb medulloblastoma GGGGAAAAAA (4) TAGAGTGTAA TCAGAGGATG 32.3 0.0323 P8 GC+1d culture GATGGCACCA (3) GGGGAAAAAA (4) TAGAGTGTAA 5.6 0.0056 P8 GC+SHH+1d culture TAGAGTGTAA 4.7 0.0047 3T3 fibroblasts CAGGAGCAGA (3) TCAGAGGATG 7 0.007 E15 cortex GATGGCACCA (3) GGGGAAAAAA (4) TAGAGTGTAA 14.7 0.0147 P1 cortex TCAGAGGATG 4.5 0.0045 Hypothalamus GATGGCACCA (3) TAGAGTGTAA TCAGAGGTGT (5) 10.8 0.0108 E12.5 retina CAGGAGCAGA (3) GGGGAAAAAA (4) TCAGAGGATG 5.7 0.0057 E14.5 retina TAGAGTGTAA 3.6 0.0036 E16.5 retina GGGGAAAAAA (4) TAGAGTGTAA TCAGAGGATG TTTTTACATC (2) 18 0.018 E18.5 retina GGGGAAAAAA (4) GTTTAATCAT TAGAGTGTAA 10.9 0.0109 P2.5 retina GGGAGGGAAA TAGAGTGTAA TTTTTACATC (2) 12.3 0.0123 P4.5 retina GTTTAATCAT TAGAGTGTAA TCAGAGGTGT (5) TTTTTACATC (2) 23.9 0.0239 P6.5 retina GGATTTCACC (2) GGGGAAAAAA (4) TAGAGTGTAA TCAGAGGATG TTTTTACATC (2) 13.4 0.0134 P10.5 crx- retina GGATTTCACC (2) TAGAGTGTAA TCAGAGGTGT (5) TTTTTACATC (2) 24.1 0.0241 P10.5 crx+ retina CAGGAGCAGA (3) GGATTTCACC (2) GGGAGGGAAA TAGAGTGTAA 9.5 0.0095 Adult retinal GGATTTCACC (2) TAGAGTGTAA 5.6 0.0056 ONL GTTTAATCAT TAGAGTGTAA 5.7 0.0057