Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.1051	Casp1	caspase 1	9	9 1.0 cM	12362
Gene Ontology	caspase activity | cysteine-type peptidase activity | cytoplasm | extracellular | hydrolase activity | induction of apoptosis | induction of apoptosis | induction of apoptosis | intracellular | protein binding | protein processing | protein processing | proteolysis and peptidolysis | regulation of apoptosis | response to hypoxia
Human Homolog	CASP1[caspase 1, apoptosis-related cysteine protease (interleukin 1, beta, convertase)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 18 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCTCTAAAAA (3) 4.9 0.0049 Cb medulloblastoma CCTGAAAAAA TCTCTAAAAA (3) 11.5 0.0115 P8 GC+1d culture CCTGAAAAAA TCTCTAAAAA (3) 3.4 0.0034 P8 GC+SHH+1d culture CCTGAAAAAA TCTCTAAAAA (3) 5.9 0.0059 P1 cortex TCTCTAAAAA (3) 4.5 0.0045 Hypothalamus TCTCTAAAAA (3) 1.8 0.0018 E14.5 retina TCTCTAAAAA (3) 3.6 0.0036 E18.5 retina CCTGAAAAAA TCTCTAAAAA (3) 7.3 0.0073 P2.5 retina TCTCTAAAAA (3) 1.8 0.0018 P4.5 retina TCTCTAAAAA (3) 4 0.004 P6.5 retina TCTCTAAAAA (3) 3.3 0.0033 P10.5 crx- retina TCTCTAAAAA (3) 1.9 0.0019 P10.5 crx+ retina CCTGAAAAAA TCTCTAAAAA (3) 3.8 0.0038