| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAAAAAGAA AGAGAGAGAG (2) AGCCTCCCTT (3) TTCTGCCTTT (2) TTTGCCACAG (3)
| 21.1 | 0.0211 |
| Cb medulloblastoma | AAAAAAAGAA AGAGAGAGAG (2) AGCCTCCCTT (3)
| 32.3 | 0.0323 |
| P8 GC+1d culture | AAAAAAAGAA AGAGAGAGAG (2) AGCCTCCCTT (3)
| 10.2 | 0.0102 |
| P8 GC+SHH+1d culture | AGAGAGAGAG (2) AGCCTCCCTT (3)
| 5.8 | 0.0058 |
| E15 cortex | AGAGAGAGAG (2) AGCCTCCCTT (3)
| 14.8 | 0.0148 |
| P1 cortex | AGAGAGAGAG (2)
| 4.5 | 0.0045 |
| Hypothalamus | AAAAAAAGAA AGAGAGAGAG (2) AGCCTCCCTT (3) TTTGCCACAG (3)
| 29 | 0.029 |
| E12.5 retina | AAAAAAAGAA AGCCTCCCTT (3) TTCTGCCTTT (2) TTTGCCACAG (3)
| 18.8 | 0.0188 |
| E14.5 retina | AGAGAGAGAG (2) AGCCTCCCTT (3)
| 5.4 | 0.0054 |
| E16.5 retina | AGAGAGAGAG (2) AGCCTCCCTT (3)
| 7.2 | 0.0072 |
| E18.5 retina | AGAGAGAGAG (2) AGCCTCCCTT (3)
| 9.1 | 0.0091 |
| P0.5 retina | AGAGAGAGAG (2) AGCCTCCCTT (3) TTCTGCCTTT (2)
| 13.8 | 0.0138 |
| P2.5 retina | AAAAAAAGAA AGAGAGAGAG (2) AGCCTCCCTT (3) TTCTGCCTTT (2) TTTGCCACAG (3)
| 21.2 | 0.0212 |
| P4.5 retina | AGAGAGAGAG (2) AGCCTCCCTT (3)
| 11.9 | 0.0119 |
| P6.5 retina | AGAGAGAGAG (2) AGCCTCCCTT (3)
| 15 | 0.015 |
| P10.5 crx- retina | AGAGAGAGAG (2) AGCCTCCCTT (3)
| 11.2 | 0.0112 |
| P10.5 crx+ retina | AGAGAGAGAG (2)
| 5.8 | 0.0058 |
| Adult retinal | AAAAAAAGAA AGAGAGAGAG (2) AGCCTCCCTT (3)
| 26 | 0.026 |
| ONL | AAAAAAAGAA AGAGAGAGAG (2) TTTGCCACAG (3)
| 11.5 | 0.0115 |