| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAAAAAATA (3) ATTAAAAAAA (2) TAGCTCAAGC (3)
| 6.5 | 0.0065 |
| Cb medulloblastoma | AAAAAAAATA (3) GCCAGAGGAC
| 6.9 | 0.0069 |
| P8 GC+1d culture | AAAAAAAATA (3) ATTAAAAAAA (2) GATTTATATA (3) TAGCTCAAGC (3)
| 5.6 | 0.0056 |
| P8 GC+SHH+1d culture | ATTAAAAAAA (2)
| 4.7 | 0.0047 |
| 3T3 fibroblasts | ATTAAAAAAA (2)
| 3.5 | 0.0035 |
| E15 cortex | TAGCTCAAGC (3)
| 4.9 | 0.0049 |
| P1 cortex | GATTTTTTTT (3)
| 4.5 | 0.0045 |
| Hypothalamus | ATTAAAAAAA (2) GATTTATATA (3) GCCAGAGGAC TAGCTCAAGC (3)
| 10.8 | 0.0108 |
| E12.5 retina | ATTAAAAAAA (2) TAGCTCAAGC (3)
| 3.8 | 0.0038 |
| E14.5 retina | ATTAAAAAAA (2)
| 10.9 | 0.0109 |
| E16.5 retina | AAAAAAAATA (3) ATTAAAAAAA (2) GATTTATATA (3) TAGCTCAAGC (3)
| 10.8 | 0.0108 |
| E18.5 retina | AAAAAAAATA (3) ATTAAAAAAA (2)
| 12.7 | 0.0127 |
| P0.5 retina | GCCAGAGGAC TAGCTCAAGC (3)
| 9.9 | 0.0099 |
| P2.5 retina | ATTAAAAAAA (2) GATTTATATA (3) TAGCTCAAGC (3)
| 7.1 | 0.0071 |
| P4.5 retina | AAAAAAAATA (3) ATTAAAAAAA (2) GATTTATATA (3) TAGCTCAAGC (3)
| 11.9 | 0.0119 |
| P6.5 retina | GATTTATATA (3) TAGCTCAAGC (3)
| 6.7 | 0.0067 |
| P10.5 crx- retina | ATTAAAAAAA (2) GATTTATATA (3)
| 3.8 | 0.0038 |
| P10.5 crx+ retina | GATTTATATA (3) GATTTTTTTT (3) TAGCTCAAGC (3)
| 7.6 | 0.0076 |
| Adult retinal | TAGCTCAAGC (3)
| 5.6 | 0.0056 |
| ONL | AAAAAAAATA (3) GATTTATATA (3) GCCAGAGGAC
| 9.5 | 0.0095 |