| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CAGGCAGAAT (4) GTGGGAGTTG GTGGTGTACA TTATTTTGTA
| 8.1 | 0.0081 |
| Cb medulloblastoma | CCCTGGTCCT GGACAGAATA
| 4.6 | 0.0046 |
| P8 GC+1d culture | CAGGCAGAAT (4) CCCTATTTTT TTATTTTGTA
| 5.6 | 0.0056 |
| P8 GC+SHH+1d culture | CAGGCAGAAT (4) GTGGGAGTTG TTATTTTGTA
| 3.6 | 0.0036 |
| 3T3 fibroblasts | CAGGCAGAAT (4) GTGGGAGTTG
| 7 | 0.007 |
| E15 cortex | CCCTGGTCCT
| 4.9 | 0.0049 |
| P1 cortex | CCCTATTTTT
| 4.5 | 0.0045 |
| Hypothalamus | CAGGCAGAAT (4)
| 1.8 | 0.0018 |
| E12.5 retina | CAGGCAGAAT (4) GGACAGAATA TTATTTTGTA
| 9.4 | 0.0094 |
| E14.5 retina | GGACAGAATA TTATTTTGTA
| 5.4 | 0.0054 |
| E16.5 retina | GGACAGAATA GTGGGAGTTG TTATTTTGTA
| 5.4 | 0.0054 |
| E18.5 retina | CAGGCAGAAT (4) GTGGTGTACA
| 9.1 | 0.0091 |
| P0.5 retina | CAGGCAGAAT (4) CCCTGGTCCT
| 4 | 0.004 |
| P2.5 retina | AAGTCCTGGG (4) CAGGCAGAAT (4) CCTACAATCC (2) GGACAGAATA GTGGTGTACA
| 10.7 | 0.0107 |
| P4.5 retina | CAGGCAGAAT (4) CCCTATTTTT CCTACAATCC (2) GTGGTGTACA
| 10 | 0.01 |
| P6.5 retina | CCTACAATCC (2)
| 1.7 | 0.0017 |
| P10.5 crx- retina | CAGGCAGAAT (4) CCCTATTTTT
| 3.8 | 0.0038 |
| P10.5 crx+ retina | CAGGCAGAAT (4)
| 1.9 | 0.0019 |
| Adult retinal | AAGTCCTGGG (4) GGACAGAATA GTGGGAGTTG
| 7.5 | 0.0075 |
| ONL | AAGTCCTGGG (4) CAGGCAGAAT (4)
| 17.2 | 0.0172 |