Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.1104	Ube1x	ubiquitin-activating enzyme E1, Chr X	X	X 5.7 cM	22201
Gene Ontology	ATP binding | catalytic activity | ligase activity | protein modification | ubiquitin activating enzyme activity | ubiquitin cycle | ubiquitin-dependent protein catabolism
Human Homolog	UBE1[ubiquitin-activating enzyme E1 (A1S9T and BN75 temperature sensitivity complementing)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 150 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGGCATTGAA ATCCAGCACA (2) CAGAAGAAGA GACACCATTG GACCACTGCC (3) GAGGTCTGAG GCCCGGAAAT TAGCCAAGCC TGAATTTTTG TGGATCCTGA (5) TTCTTTTTTA (3) TTGGCCAGGC 156.6 0.1566 Cb medulloblastoma AGGCATTGAA GACACCATTG GCCCAGAACG GGGCCCCGGG (3) GTTCAGCAGG (2) TAGCCAAGCC TGAATTTTTG TGGATCCTGA (5) 154.8 0.1548 P8 GC+1d culture AGGCATTGAA ATCCAGCACA (2) GACCACTGCC (3) GAGGTCTGAG GCCCGGAAAT TAGCCAAGCC TGAATTTTTG TGCGGGCACT (2) TGGATCCTGA (5) 88.9 0.0889 P8 GC+SHH+1d culture AGGCATTGAA ATCCAGCACA (2) CAGAAGAAGA GCCCGGAAAT GGGCCCCGGG (3) GTGATCTCCA GTTCAGCAGG (2) TAGCCAAGCC TGAATTTTTG TGCGGGCACT (2) TGGATCCTGA (5) TTCTTTTTTA (3) TTGGCCAGGC TTTTTCATTG 86.8 0.0868 3T3 fibroblasts GAGGTCTGAG GGGCCCCGGG (3) GTGGGTGGGT TAGCCAAGCC TGAATTTTTG 42 0.042 E15 cortex GGCGGGATGA TAGCCAAGCC TGGATCCTGA (5) 207.8 0.2078 P1 cortex ATCCAGCACA (2) GCCCGGAAAT TAGCCAAGCC TGGATCCTGA (5) 36.2 0.0362 Hypothalamus AGGCATTGAA ATCCAGCACA (2) GACAACTGCC GCCCAGAACG GCCCGGAAAT GCGGCCCAGC GGCGGGATGA GGGCCCCGGG (3) GTTCAGCAGG (2) TAGCCAAGCC TGCGGGCACT (2) TGGATCCTGA (5) 94 0.094 E12.5 retina AGGCATTGAA ATCCAGCACA (2) GCCCGGAAAT GCGGCCCAGC TAGCCAAGCC TGGATCCTGA (5) 63.9 0.0639 E14.5 retina AGGCATTGAA ATCCAGCACA (2) GCGGCCCAGC GTGATCTCCA TAGCCAAGCC TGGATCCTGA (5) TTGGCCAGGC TTTTTCATTG 109.4 0.1094 E16.5 retina AGGCATTGAA ATCCAGCACA (2) GACACCATTG GCGGCCCAGC GGCGGGATGA TAGCCAAGCC TGGATCCTGA (5) TGTGCCAAGG TTGGCCAGGC TTTTTCATTG 114 0.114 E18.5 retina AGGCATTGAA ATCCAGCACA (2) GCCCAGAACG TAGCCAAGCC TGAATTTTTG TTGGCCAGGC 65.4 0.0654 P0.5 retina AGGCATTGAA ATCCAGCACA (2) GAGGTCTGAG GGCGGGATGA GTGGGTGGGT TAGCCAAGCC TGGATCCTGA (5) TGTGCCAAGG 57.1 0.0571 P2.5 retina AGGCATTGAA ATCCAGCACA (2) GACAACTGCC GGGCCCCGGG (3) TAGCCAAGCC TGGATCCTGA (5) 49.4 0.0494 P4.5 retina AGGCATTGAA ATCCAGCACA (2) GACCACTGCC (3) TAGCCAAGCC TGGATCCTGA (5) 53.6 0.0536 P6.5 retina GGGCCCCGGG (3) TAGCCAAGCC TGAATTTTTG TGGATCCTGA (5) TGTGCCAAGG 48.5 0.0485 P10.5 crx- retina AGGCATTGAA ATCCAGCACA (2) GAGGTCTGAG GCCCAGAACG GCGGCCCAGC GTTCAGCAGG (2) TAGCCAAGCC TGGATCCTGA (5) TGTGCCAAGG TTGGCCAGGC 143.3 0.1433 P10.5 crx+ retina CAGAAGAAGA GAGGTCTGAG GGGCCCCGGG (3) GTGATCTCCA GTGGGTGGGT TAGCCAAGCC TGGATCCTGA (5) TTCTTTTTTA (3) TTGGCCAGGC 71 0.071 Adult retinal GACCACTGCC (3) GAGGTCTGAG GGGCCCCGGG (3) TAGCCAAGCC TGGATCCTGA (5) TTCTTTTTTA (3) TTTTTCATTG 37.2 0.0372 ONL TAGCCAAGCC TGGATCCTGA (5) TTTTTCATTG 11.4 0.0114