| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CAAATGCTGT (2) GACCTGGAGC TGCCCATCTC
| 11.4 | 0.0114 |
| Cb medulloblastoma | CAAATGCTGT (2)
| 4.6 | 0.0046 |
| P8 GC+1d culture | CAAATGCTGT (2) GACCTGGAGC TGCCCATCTC TGCTGTTCTG
| 9 | 0.009 |
| P8 GC+SHH+1d culture | CAAATGCTGT (2) GACCTGGAGC TGCCCATCTC
| 18.7 | 0.0187 |
| 3T3 fibroblasts | CAAATGCTGT (2) GACCTGGAGC TGCCCATCTC
| 52.5 | 0.0525 |
| E15 cortex | GACCTGGAGC GAGAGGGCTT
| 9.8 | 0.0098 |
| P1 cortex | TGCCCATCTC
| 4.5 | 0.0045 |
| Hypothalamus | CAAATGCTGT (2) GAGAGGGCTT GGGCTCCTTG (2) TGCCCATCTC
| 9 | 0.009 |
| E12.5 retina | CAAATGCTGT (2) GGAAGACTGA TGCCCATCTC
| 18.8 | 0.0188 |
| E14.5 retina | CAAATGCTGT (2) GGGCTCCTTG (2) TGCCCATCTC
| 18.2 | 0.0182 |
| E16.5 retina | CAAATGCTGT (2) GACCTGGAGC TGCCCATCTC
| 5.4 | 0.0054 |
| E18.5 retina | CAAATGCTGT (2) TGCCCATCTC TGCTGTTCTG
| 10.9 | 0.0109 |
| P0.5 retina | CAAATGCTGT (2) TGCCCATCTC
| 11.8 | 0.0118 |
| P2.5 retina | CAAATGCTGT (2) GGAAGACTGA GGGCTCCTTG (2) TGCCCATCTC
| 19.5 | 0.0195 |
| P4.5 retina | CAAATGCTGT (2) TGCCCATCTC
| 6 | 0.006 |
| P6.5 retina | CAAATGCTGT (2)
| 1.7 | 0.0017 |
| P10.5 crx- retina | CAAATGCTGT (2) TGCCCATCTC TGCTGTTCTG
| 14.9 | 0.0149 |
| P10.5 crx+ retina | GGAAGACTGA TGCCCATCTC TGCTGTTCTG
| 7.6 | 0.0076 |
| Adult retinal | GACCTGGAGC GGGCTCCTTG (2) TGCTGTTCTG
| 5.7 | 0.0057 |
| ONL | GAGAGGGCTT TGCCCATCTC
| 3.8 | 0.0038 |