Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.117068	Cldn2	claudin 2	X		12738
Gene Ontology	extracellular space | integral to membrane | membrane | structural molecule activity | tight junction
Human Homolog	CLDN2[claudin 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 33 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCTGCTGCCC (2) 1.6 0.0016 Cb medulloblastoma ATTCATAATT TAGGAGCGGA 4.6 0.0046 P8 GC+1d culture CTTGGAGAAC GAATTTTGAA (2) GCTGCTGCCC (2) 3.3 0.0033 P8 GC+SHH+1d culture ATTCATAATT CTTGGAGAAC GAATTTTGAA (2) TAGGAGCGGA 7.1 0.0071 P1 cortex ATTCATAATT 4.5 0.0045 Hypothalamus CTTGGAGAAC GAATTTTGAA (2) GCTGCTGCCC (2) 5.4 0.0054 E14.5 retina ATTCATAATT 1.8 0.0018 E16.5 retina CTTGGAGAAC GAATTTTGAA (2) 7.2 0.0072 E18.5 retina GAATTTTGAA (2) TTTACTTTGT (3) 3.6 0.0036 P2.5 retina ATTCATAATT 1.8 0.0018 P4.5 retina ATTCATAATT CTTGGAGAAC TAGGAGCGGA 8 0.008 P6.5 retina ATTCATAATT 1.7 0.0017 P10.5 crx- retina GAATTTTGAA (2) TTTACTTTGT (3) 3.8 0.0038 P10.5 crx+ retina ATTCATAATT GAATTTTGAA (2) GCTGCTGCCC (2) TTTACTTTGT (3) 9.5 0.0095 Adult retinal CTTGGAGAAC GAATTTTGAA (2) GCTGCTGCCC (2) 5.7 0.0057