Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.120911
Hdhd4
haloacid dehalogenase-like hydrolase domain containing 4
2
67311
Mm.120911
A130094D17Rik
RIKEN cDNA A130094D17 gene
2
319460
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 31 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
ATTCCGAATT (
2
)
GTTCAAAGCC
6.5
0.0065
Cb medulloblastoma
GTCTACACAG
(
3
)
2.3
0.0023
P8 GC+1d culture
ACATTGTTAT
(
2
)
CTGGCCTCAA (
3
)
5.7
0.0057
P8 GC+SHH+1d culture
ACATTGTTAT
(
2
)
GTTCAAAGCC
7.1
0.0071
E15 cortex
GTTCAAAGCC
4.9
0.0049
Hypothalamus
ACATTGTTAT
(
2
)
CTGGCCTCAA (
3
)
5.4
0.0054
E12.5 retina
ACATTGTTAT
(
2
)
7.5
0.0075
E14.5 retina
GTCTACACAG
(
3
)
3.6
0.0036
E16.5 retina
CTGGCCTCAA (
3
)
GTCTACACAG
(
3
)
GTTCAAAGCC
5.4
0.0054
E18.5 retina
ACATTGTTAT
(
2
)
3.6
0.0036
P0.5 retina
ACATTGTTAT
(
2
)
2
0.002
P2.5 retina
ACATTGTTAT
(
2
)
1.8
0.0018
P4.5 retina
ATTCCGAATT (
2
)
CTGGCCTCAA (
3
)
4
0.004
P6.5 retina
ACATTGTTAT
(
2
)
ATTCCGAATT (
2
)
5
0.005
P10.5 crx- retina
ACATTGTTAT
(
2
)
3.7
0.0037
P10.5 crx+ retina
CTGGCCTCAA (
3
)
1.9
0.0019
Adult retinal
ACATTGTTAT
(
2
)
CGCAAGGCGG
(
2
)
5.6
0.0056
ONL
ACATTGTTAT
(
2
)
ATTCCGAATT (
2
)
CGCAAGGCGG
(
2
)
CTGGCCTCAA (
3
)
GTCTACACAG
(
3
)
13.3
0.0133
