Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.121514
A930004K21Rik
RIKEN cDNA A930004K21 gene
2
2 E5
228564
Mm.121514
4930402M22Rik
RIKEN cDNA 4930402M22 gene
2
73794
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
Total 8 In Situ Hybridization Images
Images -- Click to Enlarge
SAGE Tags
Total 32 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAGATTATTT
(
3
)
GGTGGGAATG
(
4
)
8.2
0.0082
Cb medulloblastoma
AAGATTATTT
(
3
)
ACTCCTCCCA
GGTGGGAATG
(
4
)
9.2
0.0092
P8 GC+1d culture
AAGATTATTT
(
3
)
ACTCCTCCCA
4.5
0.0045
P8 GC+SHH+1d culture
AAGATTATTT
(
3
)
CCTTCCCAGG
GGTGGGAATG
(
4
)
5.9
0.0059
3T3 fibroblasts
ACTCCTCCCA
3.5
0.0035
Hypothalamus
AAGATTATTT
(
3
)
3.6
0.0036
E12.5 retina
CCTTCCCAGG
1.9
0.0019
E14.5 retina
AAGATTATTT
(
3
)
CCTTCCCAGG
5.4
0.0054
E16.5 retina
AAGATTATTT
(
3
)
CCTTCCCAGG
3.6
0.0036
E18.5 retina
AAGATTATTT
(
3
)
7.3
0.0073
P0.5 retina
AAGATTATTT
(
3
)
ACTCAAAGTC
(
2
)
GGTGGGAATG
(
4
)
7.9
0.0079
P2.5 retina
AAGATTATTT
(
3
)
ACTCAAAGTC
(
2
)
GGTGGGAATG
(
4
)
17.7
0.0177
P4.5 retina
AAGATTATTT
(
3
)
ACTCAAAGTC
(
2
)
GGTGGGAATG
(
4
)
23.8
0.0238
P6.5 retina
AAGATTATTT
(
3
)
6.7
0.0067
P10.5 crx- retina
AAGATTATTT
(
3
)
CCTTCCCAGG
7.5
0.0075
P10.5 crx+ retina
AAGATTATTT
(
3
)
1.9
0.0019
ONL
AAGATTATTT
(
3
)
3.8
0.0038
