Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.122430	6130401J04Rik	RIKEN cDNA 6130401J04 gene	1		66799
Gene Ontology	ligase activity | protein modification | ubiquitin conjugating enzyme activity | ubiquitin cycle
Human Homolog	FLJ11011[hypothetical protein FLJ11011]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 83 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGCCCTATTG CATCTTTAAA GGCCTCTTCT TTTTATTTGT 16.3 0.0163 Cb medulloblastoma AGCCCTATTG CATCTTTAAA GGCCTCTTCT TTTGCTCTGG (3) 25.4 0.0254 P8 GC+1d culture AGCCCTATTG CATCTTTAAA CTGTTGGGCT (2) CTTTTTTATT GAAAGTTTTC GTGTAGGGCT TTTGCTCTGG (3) TTTTATTTGT 19.2 0.0192 P8 GC+SHH+1d culture AGCCCTATTG CATCTTTAAA GGCCTCTTCT TTTGCTCTGG (3) TTTTATTTGT 14 0.014 3T3 fibroblasts AGCCCTATTG GGCCTCTTCT 21 0.021 E15 cortex GGCCTCTTCT 29.7 0.0297 P1 cortex CTTTTTTATT 4.5 0.0045 Hypothalamus CATCTTTAAA GAAAGTTTTC GGCCTCTTCT TTTTATTTGT 23.5 0.0235 E12.5 retina GAAAGTTTTC TTTGCTCTGG (3) TTTTATTTGT 13.2 0.0132 E14.5 retina CATCTTTAAA GCCTGTGCAT (2) GGCCTCTTCT TGATCGCTGG TTTGCTCTGG (3) TTTTATTTGT 34.5 0.0345 E16.5 retina AGCCCTATTG CATCTTTAAA CTGTTGGGCT (2) GAAAGTTTTC GTGTAGGGCT TGATCGCTGG TTTGCTCTGG (3) TTTTATTTGT 30.7 0.0307 E18.5 retina CATCTTTAAA GGCCTCTTCT TCTCAAACAA TTTTATTTGT 19.9 0.0199 P0.5 retina AGCCCTATTG GCCTGTGCAT (2) GGCCTCTTCT TTTTATTTGT 19.6 0.0196 P2.5 retina AGCCCTATTG CATCTTTAAA CTTTTTTATT GAAAGTTTTC GCCTGTGCAT (2) TTTTATTTGT 24.8 0.0248 P4.5 retina CATCTTTAAA GAAAGTTTTC GCCTGTGCAT (2) TTTGCTCTGG (3) TTTTATTTGT 15.9 0.0159 P6.5 retina CATCTTTAAA TCTCAAACAA TTTGCTCTGG (3) 11.7 0.0117 P10.5 crx- retina AGCCCTATTG CTGTTGGGCT (2) TCTCAAACAA TTTGCTCTGG (3) TTTTATTTGT 16.9 0.0169 P10.5 crx+ retina CATCTTTAAA CTTTTTTATT GAAAGTTTTC 9.6 0.0096 Adult retinal CATCTTTAAA CTGTTGGGCT (2) GAAAGTTTTC TTTGCTCTGG (3) TTTTATTTGT 13.1 0.0131 ONL AGCCCTATTG GAAAGTTTTC 3.8 0.0038