Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.12309
D1Ertd622e
DNA segment, Chr 1, ERATO Doi 622, expressed
1
1 60.2 cM
52392
Human Homolog
LOC90355[hypothetical gene supported by AF038182; BC009203]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 35 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GGCCCTTGCC
1.6
0.0016
Cb medulloblastoma
AACATCAAGG (
2
)
GAAAGTTACT
(
2
)
GGCCCTTGCC
TAGGAAAGAG
(
2
)
9.2
0.0092
P8 GC+1d culture
CGGAAATTAA
GAAAGTTACT
(
2
)
2.2
0.0022
P8 GC+SHH+1d culture
GAAAGTTACT
(
2
)
1.2
0.0012
E15 cortex
GGCCCTTGCC
TAGGAAAGAG
(
2
)
9.8
0.0098
Hypothalamus
TAGGAAAGAG
(
2
)
1.8
0.0018
E12.5 retina
GAAAGTTACT
(
2
)
1.9
0.0019
E14.5 retina
GAAAGTTACT
(
2
)
TTGCCAACAC
5.4
0.0054
E16.5 retina
GAAAGTTACT
(
2
)
GGCCCTTGCC
3.6
0.0036
E18.5 retina
GAAAGTTACT
(
2
)
TAGGAAAGAG
(
2
)
10.9
0.0109
P0.5 retina
GAAAGTTACT
(
2
)
GGCCCTTGCC
TAGGAAAGAG
(
2
)
6
0.006
P2.5 retina
CGGAAATTAA
GAAAGTTACT
(
2
)
GGCCCTTGCC
8.9
0.0089
P4.5 retina
GAAAGTTACT
(
2
)
2
0.002
P10.5 crx- retina
TTGCCAACAC
3.7
0.0037
P10.5 crx+ retina
AACATCAAGG (
2
)
GAAAGTTACT
(
2
)
3.8
0.0038
Adult retinal
CGGAAATTAA
GAAAGTTACT
(
2
)
GGCCCTTGCC
TAGGAAAGAG
(
2
)
11.2
0.0112
ONL
AACATCAAGG (
2
)
TAGGAAAGAG
(
2
)
TTGCCAACAC
5.7
0.0057
