| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AGGAGAAATG (2) TCTGTGATGG TGAGTAAGAA
| 4.8 | 0.0048 |
| Cb medulloblastoma | GGGGTGGAGG (2) TGAGTAAGAA
| 6.9 | 0.0069 |
| P8 GC+1d culture | AGGAGAAATG (2) TCTGTGATGG TGAGTAAGAA
| 5.6 | 0.0056 |
| P8 GC+SHH+1d culture | ATTTTATTCT (2) GGGGTGGAGG (2) TGAGTAAGAA
| 5.9 | 0.0059 |
| E15 cortex | AGGAGAAATG (2) TCTGTGATGG TGAGTAAGAA
| 14.7 | 0.0147 |
| P1 cortex | ATTTTATTCT (2) TGAGTAAGAA
| 9 | 0.009 |
| Hypothalamus | AGGAGAAATG (2) ATTTATTCTT TCTGTGATGG TGAGTAAGAA
| 12.6 | 0.0126 |
| E12.5 retina | AGGAGAAATG (2) TCTGTGATGG
| 3.8 | 0.0038 |
| E14.5 retina | AGGAGAAATG (2) TGAGTAAGAA
| 12.7 | 0.0127 |
| E16.5 retina | AGGAGAAATG (2) TGAGTAAGAA
| 3.6 | 0.0036 |
| E18.5 retina | ATTTTATTCT (2) TGAGTAAGAA
| 20 | 0.02 |
| P0.5 retina | TGAGTAAGAA
| 3.9 | 0.0039 |
| P2.5 retina | ATTTTATTCT (2) TGAGTAAGAA
| 17.6 | 0.0176 |
| P4.5 retina | AGGAGAAATG (2) ATTTTATTCT (2) TGAGTAAGAA
| 19.9 | 0.0199 |
| P6.5 retina | ATTTATTCTT ATTTTATTCT (2) GGGGTGGAGG (2) TGAGTAAGAA
| 16.7 | 0.0167 |
| P10.5 crx- retina | ATTTTATTCT (2) TGAGTAAGAA
| 9.3 | 0.0093 |
| P10.5 crx+ retina | ATTTTATTCT (2) TGAGTAAGAA
| 13.4 | 0.0134 |
| Adult retinal | TGAGTAAGAA
| 1.9 | 0.0019 |
| ONL | ATTTATTCTT GGGGTGGAGG (2) TGAGTAAGAA
| 9.5 | 0.0095 |