Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.1243	Rxrb	retinoid X receptor beta	17	17 C (17 18.49 cM)	20182
Gene Ontology	DNA binding | nucleus | receptor activity | regulation of transcription, DNA-dependent | steroid binding
Human Homolog	RXRB[retinoid X receptor, beta]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 10 In Situ Hybridization Images

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SAGE Tags

Total 60 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAGGCAAAAC (2) GGAGCAGGGC GTTTTTGCCC TCTGTGTGTC 16.2 0.0162 Cb medulloblastoma CAGGCAAAAC (2) GGAGCAGGGC GTTTTTGCCC 11.5 0.0115 P8 GC+1d culture CAGGCAAAAC (2) CCGCGGGGCA GGAGCAGGGC GTTTTTGCCC TCTGTGTGTC 13.6 0.0136 P8 GC+SHH+1d culture CAGCCCAGCA CAGGCAAAAC (2) GTTTTTGCCC TCTGTGTGTC 22.3 0.0223 3T3 fibroblasts CAGGCAAAAC (2) 10.5 0.0105 E15 cortex CAGGCAAAAC (2) GTTTTTGCCC 14.8 0.0148 P1 cortex CAGGCAAAAC (2) GTTTTTGCCC 13.6 0.0136 Hypothalamus CAGGCAAAAC (2) GGAGCAGGGC GTTTTTGCCC TCTGTGTGTC 16.2 0.0162 E12.5 retina CAGGCAAAAC (2) GTTTTTGCCC TCTGTGTGTC 37.6 0.0376 E14.5 retina CAGGCAAAAC (2) 12.8 0.0128 E16.5 retina CAGCCCAGCA CAGGCAAAAC (2) GTTTTTGCCC 12.7 0.0127 E18.5 retina CAGGCAAAAC (2) GTTTTTGCCC 16.3 0.0163 P0.5 retina CAGGCAAAAC (2) GGAGCAGGGC GTTTTTGCCC 17.7 0.0177 P2.5 retina CAGGCAAAAC (2) GTTTTTGCCC TCTGTGTGTC 31.7 0.0317 P4.5 retina CAGGCAAAAC (2) GGAGCAGGGC GTTTTTGCCC TCTGTGTGTC 29.8 0.0298 P6.5 retina CAGGCAAAAC (2) CCGCGGGGCA GTTTTTGCCC 20.1 0.0201 P10.5 crx- retina CAGGCAAAAC (2) GTTTTTGCCC TCTGTGTGTC 24.1 0.0241 P10.5 crx+ retina CAGGCAAAAC (2) GTTTTTGCCC TCTGTGTGTC 21.1 0.0211 Adult retinal CAGGCAAAAC (2) CCGCGGGGCA GTTTTTGCCC TCTGTGTGTC 18.6 0.0186 ONL CAGCCCAGCA CAGGCAAAAC (2) GTTTTTGCCC 38.3 0.0383