| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | TGACTGATGG TGTGTGTGTG (2)
| 29.3 | 0.0293 |
| Cb medulloblastoma | CTTCTCTTCT (3) TGTGTGTGTG (2)
| 32.4 | 0.0324 |
| P8 GC+1d culture | TGACTGATGG TGTGTGTGTG (2) TTGAAACTGG
| 29.6 | 0.0296 |
| P8 GC+SHH+1d culture | TGAACTGAGG TGTGTGTGTG (2) TTGAAACTGG
| 35.2 | 0.0352 |
| 3T3 fibroblasts | TGTGTGTGTG (2)
| 28 | 0.028 |
| E15 cortex | TGAACTGAGG
| 4.9 | 0.0049 |
| P1 cortex | CATCCAGCCC TGTGTGTGTG (2)
| 22.7 | 0.0227 |
| Hypothalamus | CTTCTCTTCT (3) GCGGCGGCAG (3) TGTGTGTGTG (2) TTGAAACTGG
| 34.4 | 0.0344 |
| E12.5 retina | ATGTTTCTTG TGAACTGAGG TGTGTGTGTG (2) TTGAAACTGG
| 48.9 | 0.0489 |
| E14.5 retina | CTTCTCTTCT (3) GCGGCGGCAG (3) TGTGTGTGTG (2)
| 60.1 | 0.0601 |
| E16.5 retina | CATCCAGCCC CTTTTCATTT (2) TGTGTGTGTG (2) TTGAAACTGG
| 47 | 0.047 |
| E18.5 retina | TGTGTGTGTG (2)
| 47.3 | 0.0473 |
| P0.5 retina | TGAACTGAGG TGTGTGTGTG (2)
| 27.5 | 0.0275 |
| P2.5 retina | CATCCAGCCC GCGGCGGCAG (3) TGAACTGAGG TGTGTGTGTG (2) TTGAAACTGG
| 44.1 | 0.0441 |
| P4.5 retina | CATCCAGCCC TGACTGATGG TGTGTGTGTG (2) TTGAAACTGG
| 53.6 | 0.0536 |
| P6.5 retina | ATGTTTCTTG CATCCAGCCC CTTTTCATTT (2) TGAACTGAGG TGACTGATGG TGTGTGTGTG (2)
| 53.5 | 0.0535 |
| P10.5 crx- retina | CATCCAGCCC CTTTTCATTT (2) TGAACTGAGG TGTGTGTGTG (2) TTGAAACTGG
| 67 | 0.067 |
| P10.5 crx+ retina | ATGTTTCTTG CTTTTCATTT (2) TGAACTGAGG TGTGTGTGTG (2) TTGAAACTGG
| 57.6 | 0.0576 |
| Adult retinal | TGAACTGAGG TGTGTGTGTG (2) TTGAAACTGG
| 57.5 | 0.0575 |
| ONL | TGACTGATGG TGTGTGTGTG (2) TTGAAACTGG
| 28.7 | 0.0287 |